Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 AC011742.3-201ENST00000439053 820 ntBASIC21.86■■□□□ 1.09
HFM1A2PYH4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 ST13P19-201ENST00000442505 1124 ntBASIC21.86■■□□□ 1.09
HFM1A2PYH4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 AC100757.4-201ENST00000626934 759 ntBASIC21.86■■□□□ 1.09
HFM1A2PYH4 AC138627.1-207ENST00000641560 1006 ntBASIC21.86■■□□□ 1.09
HFM1A2PYH4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 AL390755.1-201ENST00000623716 2027 ntBASIC21.86■■□□□ 1.09
HFM1A2PYH4 HCG11-201ENST00000411553 5696 ntBASIC21.86■■□□□ 1.09
HFM1A2PYH4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC21.86■■□□□ 1.09
HFM1A2PYH4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HFM1A2PYH4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 AC008132.1-202ENST00000342005 1389 ntBASIC21.85■■□□□ 1.09
HFM1A2PYH4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 AC090340.1-201ENST00000620778 4980 ntBASIC21.85■■□□□ 1.09
HFM1A2PYH4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 AC005077.2-201ENST00000449786 690 ntBASIC21.85■■□□□ 1.09
HFM1A2PYH4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC21.85■■□□□ 1.09
HFM1A2PYH4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC21.85■■□□□ 1.09
HFM1A2PYH4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HFM1A2PYH4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HFM1A2PYH4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HFM1A2PYH4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HFM1A2PYH4 CYP46A4P-201ENST00000414953 267 ntBASIC21.84■■□□□ 1.09
HFM1A2PYH4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 KRTAP19-9P-201ENST00000421795 191 ntBASIC21.84■■□□□ 1.09
HFM1A2PYH4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 AL805961.1-203ENST00000641078 1258 ntBASIC21.84■■□□□ 1.09
HFM1A2PYH4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HFM1A2PYH4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HFM1A2PYH4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HFM1A2PYH4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
HFM1A2PYH4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HFM1A2PYH4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HFM1A2PYH4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
HFM1A2PYH4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
HFM1A2PYH4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HFM1A2PYH4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HFM1A2PYH4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC21.83■■□□□ 1.09
HFM1A2PYH4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HFM1A2PYH4 RN7SL574P-201ENST00000581512 297 ntBASIC21.83■■□□□ 1.09
HFM1A2PYH4 RN7SL190P-201ENST00000582519 257 ntBASIC21.83■■□□□ 1.09
HFM1A2PYH4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms