Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AC023310.3-201ENST00000557027 670 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AC100756.1-201ENST00000562736 682 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AC138749.3-201ENST00000567691 622 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AC092364.2-202ENST00000597012 1073 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AC093813.1-201ENST00000605066 256 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AC116165.1-201ENST00000611806 668 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AC004790.1-201ENST00000612686 536 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 AC027601.5-201ENST00000624065 2482 ntBASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.53□□□□□ -0.08
LRTM1Q9HBL6 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRTM1Q9HBL6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 NUS1P3-201ENST00000423502 862 ntBASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 TPT1P11-201ENST00000458482 498 ntBASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 AC093512.1-201ENST00000617969 520 ntBASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 HSPA7-201ENST00000445535 1927 ntBASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LRTM1Q9HBL6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms