Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC023310.1-201ENST00000554836 735 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 BNIP3P29-201ENST00000598302 571 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 AC011447.5-201ENST00000616168 564 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSBP3Q9BWW4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 AC012508.2-201ENST00000567613 1472 ntBASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSBP3Q9BWW4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 AC136621.1-201ENST00000624017 2304 ntBASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms