Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.71■□□□□ 0.1
SMOQ99835 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMOQ99835 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SMOQ99835 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMOQ99835 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.71■□□□□ 0.1
SMOQ99835 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SMOQ99835 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.71■□□□□ 0.1
SMOQ99835 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 AC013726.1-201ENST00000563747 2285 ntBASIC15.7■□□□□ 0.1
SMOQ99835 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.7■□□□□ 0.1
SMOQ99835 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SMOQ99835 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.7■□□□□ 0.1
SMOQ99835 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SMOQ99835 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.7■□□□□ 0.1
SMOQ99835 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.7■□□□□ 0.1
SMOQ99835 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SMOQ99835 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.7■□□□□ 0.1
SMOQ99835 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.7■□□□□ 0.1
SMOQ99835 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.7■□□□□ 0.1
SMOQ99835 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.7■□□□□ 0.1
SMOQ99835 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.7■□□□□ 0.1
SMOQ99835 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.7■□□□□ 0.1
SMOQ99835 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.7■□□□□ 0.1
SMOQ99835 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.7■□□□□ 0.1
SMOQ99835 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.7■□□□□ 0.1
SMOQ99835 BX088702.1-201ENST00000610784 235 ntBASIC15.7■□□□□ 0.1
SMOQ99835 MIR6869-201ENST00000619434 62 ntBASIC15.7■□□□□ 0.1
SMOQ99835 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.7■□□□□ 0.1
SMOQ99835 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.7■□□□□ 0.1
SMOQ99835 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SMOQ99835 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SMOQ99835 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.7■□□□□ 0.1
SMOQ99835 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SMOQ99835 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SMOQ99835 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SMOQ99835 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMOQ99835 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMOQ99835 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 FGD5P1-202ENST00000614866 2498 ntBASIC15.69■□□□□ 0.1
SMOQ99835 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SMOQ99835 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SMOQ99835 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SMOQ99835 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SMOQ99835 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 MIR663B-201ENST00000408361 115 ntBASIC15.69■□□□□ 0.1
SMOQ99835 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.69■□□□□ 0.1
SMOQ99835 ALG3P1-201ENST00000508806 1114 ntBASIC15.69■□□□□ 0.1
SMOQ99835 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.69■□□□□ 0.1
SMOQ99835 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.69■□□□□ 0.1
SMOQ99835 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.69■□□□□ 0.1
SMOQ99835 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMOQ99835 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.69■□□□□ 0.1
SMOQ99835 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.69■□□□□ 0.1
SMOQ99835 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
SMOQ99835 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SMOQ99835 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SMOQ99835 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SMOQ99835 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.69■□□□□ 0.1
SMOQ99835 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
SMOQ99835 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SMOQ99835 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
SMOQ99835 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.68■□□□□ 0.1
SMOQ99835 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SMOQ99835 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms