Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRCH3Q96II8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRCH3Q96II8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRCH3Q96II8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRCH3Q96II8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRCH3Q96II8 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 RN7SL470P-201ENST00000583069 259 ntBASIC16.2■□□□□ 0.18
LRCH3Q96II8 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 SIGLEC18P-201ENST00000602271 909 ntBASIC16.2■□□□□ 0.18
LRCH3Q96II8 LINC01783-202ENST00000614408 828 ntBASIC16.2■□□□□ 0.18
LRCH3Q96II8 BX284668.2-205ENST00000619677 828 ntBASIC16.2■□□□□ 0.18
LRCH3Q96II8 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRCH3Q96II8 ME2P1-201ENST00000426028 1970 ntBASIC16.2■□□□□ 0.18
LRCH3Q96II8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LRCH3Q96II8 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AL158070.2-201ENST00000623713 1621 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AL354861.1-201ENST00000445213 355 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 KLF2P1-201ENST00000447438 1042 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 MRPL22P1-201ENST00000505398 616 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 PGAM1P12-201ENST00000505622 748 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AC027237.1-201ENST00000560942 655 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 DUX4L46-201ENST00000566845 751 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AC004466.1-201ENST00000599515 1080 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 AC006548.2-201ENST00000605217 529 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AC011471.3-201ENST00000623576 402 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRCH3Q96II8 FRMPD2B-201ENST00000431305 1347 ntBASIC16.19■□□□□ 0.18
LRCH3Q96II8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.19■□□□□ 0.18
LRCH3Q96II8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LRCH3Q96II8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH3Q96II8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH3Q96II8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LRCH3Q96II8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH3Q96II8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
LRCH3Q96II8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRCH3Q96II8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms