Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TTC16Q8NEE8 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 REXO1L5P-201ENST00000622260 2098 ntBASIC15.88■□□□□ 0.13
TTC16Q8NEE8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 AC144831.1-201ENST00000573312 2656 ntBASIC15.88■□□□□ 0.13
TTC16Q8NEE8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 ACTBP8-201ENST00000403258 1108 ntBASIC15.88■□□□□ 0.13
TTC16Q8NEE8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 Z93015.1-201ENST00000451718 390 ntBASIC15.88■□□□□ 0.13
TTC16Q8NEE8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 AP006547.1-201ENST00000563435 692 ntBASIC15.88■□□□□ 0.13
TTC16Q8NEE8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 MIR6787-201ENST00000616675 61 ntBASIC15.88■□□□□ 0.13
TTC16Q8NEE8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC16Q8NEE8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 AL365203.3-201ENST00000609742 2057 ntBASIC15.87■□□□□ 0.13
TTC16Q8NEE8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TTC16Q8NEE8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms