Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 AC015688.4-201ENST00000580780 1647 ntBASIC23.14■■□□□ 1.29
VPS8Q8N3P4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 ACTG1P2-201ENST00000415776 1125 ntBASIC23.14■■□□□ 1.29
VPS8Q8N3P4 ACTG1P11-201ENST00000425411 1125 ntBASIC23.14■■□□□ 1.29
VPS8Q8N3P4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 AC125604.1-201ENST00000496255 707 ntBASIC23.14■■□□□ 1.29
VPS8Q8N3P4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 AC009884.2-201ENST00000603110 324 ntBASIC23.14■■□□□ 1.29
VPS8Q8N3P4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 AC136759.1-202ENST00000530858 2194 ntBASIC23.14■■□□□ 1.29
VPS8Q8N3P4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
VPS8Q8N3P4 SLC9A7P1-201ENST00000554295 3311 ntBASIC23.13■■□□□ 1.29
VPS8Q8N3P4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 AL596276.2-201ENST00000447525 331 ntBASIC23.13■■□□□ 1.29
VPS8Q8N3P4 AC104073.2-201ENST00000453737 312 ntBASIC23.13■■□□□ 1.29
VPS8Q8N3P4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 AC008805.1-201ENST00000590892 364 ntBASIC23.13■■□□□ 1.29
VPS8Q8N3P4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 AC244452.3-201ENST00000636814 210 ntBASIC23.13■■□□□ 1.29
VPS8Q8N3P4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 AC018629.1-201ENST00000623381 1736 ntBASIC23.13■■□□□ 1.29
VPS8Q8N3P4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS8Q8N3P4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 AGGF1P1-201ENST00000509500 2073 ntBASIC23.12■■□□□ 1.29
VPS8Q8N3P4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 SPTLC1P5-201ENST00000450718 252 ntBASIC23.12■■□□□ 1.29
VPS8Q8N3P4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 RCC2P8-201ENST00000502779 1035 ntBASIC23.12■■□□□ 1.29
VPS8Q8N3P4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 NDUFV2P1-201ENST00000596415 907 ntBASIC23.12■■□□□ 1.29
VPS8Q8N3P4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 MYADML-201ENST00000474610 2147 ntBASIC23.12■■□□□ 1.29
VPS8Q8N3P4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC23.12■■□□□ 1.29
VPS8Q8N3P4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 SLC16A6P1-201ENST00000413214 1059 ntBASIC23.11■■□□□ 1.29
VPS8Q8N3P4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS8Q8N3P4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms