Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD1LQ86WJ1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 AC152010.1-201ENST00000415779 2006 ntBASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 AC093433.1-201ENST00000458048 571 ntBASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 CU634019.7-201ENST00000624153 1185 ntBASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 FP236241.2-201ENST00000624906 1185 ntBASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 SALL4P5-201ENST00000419001 1760 ntBASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD1LQ86WJ1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 AC022137.2-201ENST00000503482 481 ntBASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD1LQ86WJ1 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.55■□□□□ 0.56
CHD1LQ86WJ1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHD1LQ86WJ1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHD1LQ86WJ1 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC18.55■□□□□ 0.56
CHD1LQ86WJ1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD1LQ86WJ1 KRT8P35-201ENST00000483942 1338 ntBASIC18.55■□□□□ 0.56
CHD1LQ86WJ1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD1LQ86WJ1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.55■□□□□ 0.56
CHD1LQ86WJ1 MSTO2P-201ENST00000314835 1709 ntBASIC18.55■□□□□ 0.56
CHD1LQ86WJ1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHD1LQ86WJ1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms