Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 ACTBP8-201ENST00000403258 1108 ntBASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 AL512384.1-201ENST00000406683 331 ntBASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 GIMAP3P-201ENST00000495150 836 ntBASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 AC105233.6-201ENST00000642093 218 ntBASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SYNE3Q6ZMZ3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 AC012441.1-201ENST00000446669 685 ntBASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 AC068587.3-201ENST00000526613 355 ntBASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 MIR5189-201ENST00000577370 114 ntBASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 AC015936.2-201ENST00000593177 259 ntBASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNE3Q6ZMZ3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNE3Q6ZMZ3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
SYNE3Q6ZMZ3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNE3Q6ZMZ3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNE3Q6ZMZ3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.77■□□□□ 0.43
SYNE3Q6ZMZ3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNE3Q6ZMZ3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNE3Q6ZMZ3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
SYNE3Q6ZMZ3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.77■□□□□ 0.43
SYNE3Q6ZMZ3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 AL355864.2-201ENST00000447420 863 ntBASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 KRT17P7-201ENST00000451704 1104 ntBASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 LINC02084-201ENST00000606069 1096 ntBASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNE3Q6ZMZ3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms