Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 REXO1L2P-201ENST00000425429 2069 ntBASIC17.56■□□□□ 0.4
CCDC96Q2M329 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 AC108725.1-201ENST00000495472 409 ntBASIC17.56■□□□□ 0.4
CCDC96Q2M329 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 PPY2P-201ENST00000582808 702 ntBASIC17.56■□□□□ 0.4
CCDC96Q2M329 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 EEF1DP1-201ENST00000585891 896 ntBASIC17.56■□□□□ 0.4
CCDC96Q2M329 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 MROH4P-201ENST00000431302 1578 ntBASIC17.55■□□□□ 0.4
CCDC96Q2M329 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 MTX1P1-201ENST00000440904 838 ntBASIC17.55■□□□□ 0.4
CCDC96Q2M329 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 FTLP10-202ENST00000505798 471 ntBASIC17.55■□□□□ 0.4
CCDC96Q2M329 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 AP003171.2-201ENST00000528208 925 ntBASIC17.55■□□□□ 0.4
CCDC96Q2M329 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 AC106820.3-201ENST00000561653 397 ntBASIC17.55■□□□□ 0.4
CCDC96Q2M329 C2orf69P2-201ENST00000562032 1123 ntBASIC17.55■□□□□ 0.4
CCDC96Q2M329 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 KRT8P4-201ENST00000509735 1454 ntBASIC17.55■□□□□ 0.4
CCDC96Q2M329 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC96Q2M329 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC96Q2M329 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC96Q2M329 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC96Q2M329 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC96Q2M329 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 FKBP4P6-201ENST00000457486 1332 ntBASIC17.54■□□□□ 0.4
CCDC96Q2M329 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC96Q2M329 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC96Q2M329 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC96Q2M329 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC96Q2M329 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC96Q2M329 GOLGA2P4-201ENST00000441462 777 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms