Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 AC018665.1-201ENST00000622927 1362 ntBASIC14.56□□□□□ -0.08
HMGCS1Q01581 AC027601.5-201ENST00000624065 2482 ntBASIC14.56□□□□□ -0.08
HMGCS1Q01581 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMGCS1Q01581 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.56□□□□□ -0.08
HMGCS1Q01581 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 BRI3BPP1-201ENST00000594224 787 ntBASIC14.55□□□□□ -0.08
HMGCS1Q01581 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HMGCS1Q01581 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HMGCS1Q01581 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.54□□□□□ -0.08
HMGCS1Q01581 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCS1Q01581 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms