Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
TM4SF4P48230 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.72■□□□□ 0.27
TM4SF4P48230 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.72■□□□□ 0.27
TM4SF4P48230 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.72■□□□□ 0.27
TM4SF4P48230 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.72■□□□□ 0.27
TM4SF4P48230 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.72■□□□□ 0.27
TM4SF4P48230 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 RNVU1-8-201ENST00000364272 125 ntBASIC16.72■□□□□ 0.27
TM4SF4P48230 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.72■□□□□ 0.27
TM4SF4P48230 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.72■□□□□ 0.27
TM4SF4P48230 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.72■□□□□ 0.27
TM4SF4P48230 AC023141.7-201ENST00000430646 407 ntBASIC16.72■□□□□ 0.27
TM4SF4P48230 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 BPIFB5P-201ENST00000457066 1099 ntBASIC16.72■□□□□ 0.27
TM4SF4P48230 AC008026.2-201ENST00000495438 348 ntBASIC16.72■□□□□ 0.27
TM4SF4P48230 ALG1L3P-201ENST00000503331 765 ntBASIC16.72■□□□□ 0.27
TM4SF4P48230 IGHEP1-201ENST00000521393 651 ntBASIC16.72■□□□□ 0.27
TM4SF4P48230 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.72■□□□□ 0.27
TM4SF4P48230 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TM4SF4P48230 AC092862.1-201ENST00000541534 533 ntBASIC16.72■□□□□ 0.27
TM4SF4P48230 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.72■□□□□ 0.27
TM4SF4P48230 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.72■□□□□ 0.27
TM4SF4P48230 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.72■□□□□ 0.27
TM4SF4P48230 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.72■□□□□ 0.27
TM4SF4P48230 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.72■□□□□ 0.27
TM4SF4P48230 AC024909.3-201ENST00000611513 2257 ntBASIC16.72■□□□□ 0.27
TM4SF4P48230 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
TM4SF4P48230 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TM4SF4P48230 AP000845.1-201ENST00000581677 2131 ntBASIC16.72■□□□□ 0.27
TM4SF4P48230 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM4SF4P48230 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TM4SF4P48230 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TM4SF4P48230 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF4P48230 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.71■□□□□ 0.27
TM4SF4P48230 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF4P48230 PTGER4P2-201ENST00000328411 252 ntBASIC16.71■□□□□ 0.27
TM4SF4P48230 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF4P48230 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC16.71■□□□□ 0.27
TM4SF4P48230 AC004522.1-201ENST00000419978 654 ntBASIC16.71■□□□□ 0.27
TM4SF4P48230 AL929302.1-201ENST00000426556 871 ntBASIC16.71■□□□□ 0.27
TM4SF4P48230 AC092580.1-201ENST00000433998 658 ntBASIC16.71■□□□□ 0.27
TM4SF4P48230 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.71■□□□□ 0.27
TM4SF4P48230 PTGER4P3-201ENST00000458150 252 ntBASIC16.71■□□□□ 0.27
TM4SF4P48230 RN7SL767P-201ENST00000493013 295 ntBASIC16.71■□□□□ 0.27
TM4SF4P48230 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.71■□□□□ 0.27
TM4SF4P48230 AC018846.1-201ENST00000568231 183 ntBASIC16.71■□□□□ 0.27
TM4SF4P48230 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.71■□□□□ 0.27
TM4SF4P48230 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.71■□□□□ 0.27
TM4SF4P48230 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC16.71■□□□□ 0.27
TM4SF4P48230 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM4SF4P48230 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.71■□□□□ 0.27
TM4SF4P48230 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TM4SF4P48230 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TM4SF4P48230 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TM4SF4P48230 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.26
TM4SF4P48230 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
TM4SF4P48230 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.7■□□□□ 0.26
TM4SF4P48230 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.7■□□□□ 0.26
TM4SF4P48230 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.7■□□□□ 0.26
TM4SF4P48230 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 AL139384.1-201ENST00000612143 3047 ntBASIC16.7■□□□□ 0.26
TM4SF4P48230 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TM4SF4P48230 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.7■□□□□ 0.26
TM4SF4P48230 AL109809.1-201ENST00000418979 1367 ntBASIC16.7■□□□□ 0.26
TM4SF4P48230 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TM4SF4P48230 NHP2P1-201ENST00000335274 462 ntBASIC16.7■□□□□ 0.26
TM4SF4P48230 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TM4SF4P48230 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 NME6-208ENST00000435684 599 ntTSL 2 BASIC16.7■□□□□ 0.26
TM4SF4P48230 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.7■□□□□ 0.26
TM4SF4P48230 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.7■□□□□ 0.26
TM4SF4P48230 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.7■□□□□ 0.26
TM4SF4P48230 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.7■□□□□ 0.26
TM4SF4P48230 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.7■□□□□ 0.26
TM4SF4P48230 AC008972.2-201ENST00000606587 494 ntBASIC16.7■□□□□ 0.26
TM4SF4P48230 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 AL591471.1-201ENST00000621855 229 ntBASIC16.7■□□□□ 0.26
TM4SF4P48230 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.7■□□□□ 0.26
TM4SF4P48230 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.7■□□□□ 0.26
TM4SF4P48230 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF4P48230 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.7■□□□□ 0.26
TM4SF4P48230 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms