Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.17■□□□□ 0.02
LSP1P33241 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.17■□□□□ 0.02
LSP1P33241 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSP1P33241 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LSP1P33241 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LSP1P33241 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.17■□□□□ 0.02
LSP1P33241 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSP1P33241 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.17■□□□□ 0.02
LSP1P33241 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSP1P33241 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.17■□□□□ 0.02
LSP1P33241 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSP1P33241 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSP1P33241 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSP1P33241 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSP1P33241 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSP1P33241 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSP1P33241 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSP1P33241 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.17■□□□□ 0.02
LSP1P33241 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 AP002761.4-201ENST00000565433 3361 ntBASIC15.16■□□□□ 0.02
LSP1P33241 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LSP1P33241 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LSP1P33241 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LSP1P33241 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.16■□□□□ 0.02
LSP1P33241 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
LSP1P33241 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.16■□□□□ 0.02
LSP1P33241 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.16■□□□□ 0.02
LSP1P33241 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.16■□□□□ 0.02
LSP1P33241 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.16■□□□□ 0.02
LSP1P33241 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC15.16■□□□□ 0.02
LSP1P33241 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
LSP1P33241 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LSP1P33241 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LSP1P33241 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LSP1P33241 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.16■□□□□ 0.02
LSP1P33241 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSP1P33241 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LSP1P33241 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.15■□□□□ 0.02
LSP1P33241 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LSP1P33241 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.15■□□□□ 0.02
LSP1P33241 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LSP1P33241 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 AC072061.1-201ENST00000569710 2234 ntBASIC15.15■□□□□ 0.02
LSP1P33241 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSP1P33241 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LSP1P33241 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.15■□□□□ 0.02
LSP1P33241 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
LSP1P33241 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.15■□□□□ 0.02
LSP1P33241 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.15■□□□□ 0.02
LSP1P33241 EMBP1-201ENST00000458200 901 ntBASIC15.15■□□□□ 0.02
LSP1P33241 AF186996.4-201ENST00000467186 377 ntBASIC15.15■□□□□ 0.02
LSP1P33241 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.15■□□□□ 0.02
LSP1P33241 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.15■□□□□ 0.02
LSP1P33241 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.15■□□□□ 0.02
LSP1P33241 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.15■□□□□ 0.02
LSP1P33241 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.15■□□□□ 0.02
LSP1P33241 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms