Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX3O95343 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX3O95343 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX3O95343 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.76□□□□□ -0.05
SIX3O95343 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX3O95343 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.76□□□□□ -0.05
SIX3O95343 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.76□□□□□ -0.05
SIX3O95343 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SIX3O95343 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
SIX3O95343 AL354702.1-201ENST00000442006 1960 ntBASIC14.76□□□□□ -0.05
SIX3O95343 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.76□□□□□ -0.05
SIX3O95343 HSPA7-201ENST00000445535 1927 ntBASIC14.76□□□□□ -0.05
SIX3O95343 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SIX3O95343 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.76□□□□□ -0.05
SIX3O95343 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.76□□□□□ -0.05
SIX3O95343 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.76□□□□□ -0.05
SIX3O95343 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SIX3O95343 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SIX3O95343 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 AL365209.1-201ENST00000624418 6473 ntBASIC14.75□□□□□ -0.05
SIX3O95343 KRT8P14-201ENST00000414254 1442 ntBASIC14.75□□□□□ -0.05
SIX3O95343 AC015802.1-201ENST00000588104 1449 ntBASIC14.75□□□□□ -0.05
SIX3O95343 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 GRK6P1-201ENST00000400595 1711 ntBASIC14.75□□□□□ -0.05
SIX3O95343 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 INTS4P2-202ENST00000614726 2019 ntBASIC14.75□□□□□ -0.05
SIX3O95343 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.75□□□□□ -0.05
SIX3O95343 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SIX3O95343 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SIX3O95343 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.75□□□□□ -0.05
SIX3O95343 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SIX3O95343 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.75□□□□□ -0.05
SIX3O95343 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.75□□□□□ -0.05
SIX3O95343 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.75□□□□□ -0.05
SIX3O95343 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 RFPL4AP1-201ENST00000530883 850 ntBASIC14.75□□□□□ -0.05
SIX3O95343 SPDYE22P-201ENST00000582158 798 ntBASIC14.75□□□□□ -0.05
SIX3O95343 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 AC093813.1-201ENST00000605066 256 ntBASIC14.75□□□□□ -0.05
SIX3O95343 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.75□□□□□ -0.05
SIX3O95343 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SIX3O95343 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.75□□□□□ -0.05
SIX3O95343 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.75□□□□□ -0.05
SIX3O95343 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.75□□□□□ -0.05
SIX3O95343 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.75□□□□□ -0.05
SIX3O95343 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.75□□□□□ -0.05
SIX3O95343 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SIX3O95343 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SIX3O95343 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SIX3O95343 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SIX3O95343 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.74□□□□□ -0.05
SIX3O95343 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.74□□□□□ -0.05
SIX3O95343 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 AL928921.2-201ENST00000641325 2442 ntBASIC14.74□□□□□ -0.05
SIX3O95343 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
SIX3O95343 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SIX3O95343 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SIX3O95343 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.74□□□□□ -0.05
SIX3O95343 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.74□□□□□ -0.05
SIX3O95343 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.74□□□□□ -0.05
SIX3O95343 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.74□□□□□ -0.05
SIX3O95343 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms