Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CXCL13O43927 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CXCL13O43927 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.5□□□□□ -0.25
CXCL13O43927 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CXCL13O43927 AC023090.2-201ENST00000625182 2110 ntBASIC13.49□□□□□ -0.25
CXCL13O43927 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCL13O43927 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CXCL13O43927 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCL13O43927 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.49□□□□□ -0.25
CXCL13O43927 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCL13O43927 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CXCL13O43927 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCL13O43927 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCL13O43927 CD8B2-202ENST00000417670 633 ntBASIC13.49□□□□□ -0.25
CXCL13O43927 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCL13O43927 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCL13O43927 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.49□□□□□ -0.25
CXCL13O43927 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 AC023310.1-201ENST00000554836 735 ntBASIC13.49□□□□□ -0.25
CXCL13O43927 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.49□□□□□ -0.25
CXCL13O43927 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.49□□□□□ -0.25
CXCL13O43927 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.49□□□□□ -0.25
CXCL13O43927 AC138466.3-201ENST00000619983 221 ntBASIC13.49□□□□□ -0.25
CXCL13O43927 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.49□□□□□ -0.25
CXCL13O43927 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CXCL13O43927 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CXCL13O43927 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CXCL13O43927 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CXCL13O43927 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
CXCL13O43927 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CXCL13O43927 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CXCL13O43927 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
CXCL13O43927 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CXCL13O43927 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.48□□□□□ -0.25
CXCL13O43927 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCL13O43927 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CXCL13O43927 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CXCL13O43927 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCL13O43927 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.48□□□□□ -0.25
CXCL13O43927 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CXCL13O43927 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCL13O43927 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CXCL13O43927 YBX1P6-201ENST00000442962 1002 ntBASIC13.48□□□□□ -0.25
CXCL13O43927 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.48□□□□□ -0.25
CXCL13O43927 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCL13O43927 MESTP3-201ENST00000503460 968 ntBASIC13.48□□□□□ -0.25
CXCL13O43927 FTLP10-202ENST00000505798 471 ntBASIC13.48□□□□□ -0.25
CXCL13O43927 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.48□□□□□ -0.25
CXCL13O43927 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCL13O43927 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.48□□□□□ -0.25
CXCL13O43927 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCL13O43927 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.48□□□□□ -0.25
CXCL13O43927 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.48□□□□□ -0.25
CXCL13O43927 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.48□□□□□ -0.25
CXCL13O43927 OR10B1P-201ENST00000601666 907 ntBASIC13.48□□□□□ -0.25
CXCL13O43927 MIR6752-201ENST00000618442 71 ntBASIC13.48□□□□□ -0.25
CXCL13O43927 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.48□□□□□ -0.25
CXCL13O43927 AC008687.7-202ENST00000637404 953 ntBASIC13.48□□□□□ -0.25
CXCL13O43927 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.48□□□□□ -0.25
CXCL13O43927 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCL13O43927 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms