Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.36□□□□□ -0.11
CASQ2O14958 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CASQ2O14958 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CASQ2O14958 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CASQ2O14958 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CASQ2O14958 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CASQ2O14958 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CASQ2O14958 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CASQ2O14958 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.35□□□□□ -0.11
CASQ2O14958 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.35□□□□□ -0.11
CASQ2O14958 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.35□□□□□ -0.11
CASQ2O14958 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CASQ2O14958 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.35□□□□□ -0.11
CASQ2O14958 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.35□□□□□ -0.11
CASQ2O14958 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 AC108073.2-201ENST00000464002 357 ntBASIC14.35□□□□□ -0.11
CASQ2O14958 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.35□□□□□ -0.11
CASQ2O14958 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.35□□□□□ -0.11
CASQ2O14958 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.35□□□□□ -0.11
CASQ2O14958 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.35□□□□□ -0.11
CASQ2O14958 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 AL732292.2-201ENST00000609649 430 ntBASIC14.35□□□□□ -0.11
CASQ2O14958 AC004790.2-201ENST00000623588 572 ntBASIC14.35□□□□□ -0.11
CASQ2O14958 FAM90A12P-201ENST00000519497 2375 ntBASIC14.35□□□□□ -0.11
CASQ2O14958 FAM90A24P-201ENST00000520792 2369 ntBASIC14.35□□□□□ -0.11
CASQ2O14958 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CASQ2O14958 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.35□□□□□ -0.11
CASQ2O14958 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CASQ2O14958 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CASQ2O14958 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CASQ2O14958 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC14.35□□□□□ -0.11
CASQ2O14958 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CASQ2O14958 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CASQ2O14958 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CASQ2O14958 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.35□□□□□ -0.11
CASQ2O14958 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.34□□□□□ -0.11
CASQ2O14958 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CASQ2O14958 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CASQ2O14958 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CASQ2O14958 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.34□□□□□ -0.11
CASQ2O14958 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CASQ2O14958 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CASQ2O14958 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.34□□□□□ -0.11
CASQ2O14958 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.34□□□□□ -0.11
CASQ2O14958 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CASQ2O14958 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.34□□□□□ -0.11
CASQ2O14958 AC020910.6-201ENST00000623084 1459 ntBASIC14.34□□□□□ -0.11
CASQ2O14958 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
CASQ2O14958 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.34□□□□□ -0.11
CASQ2O14958 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CASQ2O14958 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.34□□□□□ -0.11
CASQ2O14958 AL596275.1-201ENST00000423464 877 ntBASIC14.34□□□□□ -0.11
CASQ2O14958 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.34□□□□□ -0.11
CASQ2O14958 AC008608.2-201ENST00000606089 416 ntBASIC14.34□□□□□ -0.11
CASQ2O14958 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CASQ2O14958 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CASQ2O14958 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.34□□□□□ -0.11
CASQ2O14958 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 CES1P1-201ENST00000421606 1704 ntBASIC14.34□□□□□ -0.11
CASQ2O14958 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.34□□□□□ -0.11
CASQ2O14958 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CASQ2O14958 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.34□□□□□ -0.11
CASQ2O14958 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.34□□□□□ -0.11
CASQ2O14958 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CASQ2O14958 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms