Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC24.99■■□□□ 1.59
CUX2O14529 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC24.99■■□□□ 1.59
CUX2O14529 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC24.99■■□□□ 1.59
CUX2O14529 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC24.99■■□□□ 1.59
CUX2O14529 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC24.99■■□□□ 1.59
CUX2O14529 MIEF1-215ENST00000637854 213 ntBASIC24.99■■□□□ 1.59
CUX2O14529 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC24.99■■□□□ 1.59
CUX2O14529 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC24.99■■□□□ 1.59
CUX2O14529 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC24.99■■□□□ 1.59
CUX2O14529 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CUX2O14529 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CUX2O14529 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CUX2O14529 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CUX2O14529 FKBP4P8-201ENST00000610931 1369 ntBASIC24.98■■□□□ 1.59
CUX2O14529 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC24.98■■□□□ 1.59
CUX2O14529 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
CUX2O14529 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CUX2O14529 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CUX2O14529 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CUX2O14529 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CUX2O14529 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CUX2O14529 AC073869.2-201ENST00000417338 1026 ntBASIC24.98■■□□□ 1.59
CUX2O14529 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CUX2O14529 NRADDP-201ENST00000437305 691 ntBASIC24.98■■□□□ 1.59
CUX2O14529 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC24.98■■□□□ 1.59
CUX2O14529 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC24.98■■□□□ 1.59
CUX2O14529 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC24.98■■□□□ 1.59
CUX2O14529 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC24.98■■□□□ 1.59
CUX2O14529 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CUX2O14529 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC24.98■■□□□ 1.59
CUX2O14529 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CUX2O14529 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC24.98■■□□□ 1.59
CUX2O14529 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CUX2O14529 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC24.98■■□□□ 1.59
CUX2O14529 AC006372.4-201ENST00000624122 1543 ntBASIC24.98■■□□□ 1.59
CUX2O14529 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CUX2O14529 WASH3P-207ENST00000560956 1394 ntBASIC24.98■■□□□ 1.59
CUX2O14529 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CUX2O14529 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CUX2O14529 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CUX2O14529 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC24.97■■□□□ 1.59
CUX2O14529 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CUX2O14529 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC24.97■■□□□ 1.59
CUX2O14529 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CUX2O14529 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
CUX2O14529 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CUX2O14529 OR10N1P-201ENST00000392758 869 ntBASIC24.97■■□□□ 1.59
CUX2O14529 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC24.97■■□□□ 1.59
CUX2O14529 B9D1-206ENST00000461069 923 ntTSL 2 BASIC24.97■■□□□ 1.59
CUX2O14529 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC24.97■■□□□ 1.59
CUX2O14529 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC24.97■■□□□ 1.59
CUX2O14529 KRT8P1-201ENST00000557533 1207 ntBASIC24.97■■□□□ 1.59
CUX2O14529 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
CUX2O14529 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC24.97■■□□□ 1.59
CUX2O14529 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CUX2O14529 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CUX2O14529 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC24.97■■□□□ 1.59
CUX2O14529 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CUX2O14529 AL137783.1-201ENST00000623494 1896 ntBASIC24.97■■□□□ 1.59
CUX2O14529 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CUX2O14529 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CUX2O14529 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CUX2O14529 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CUX2O14529 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC24.97■■□□□ 1.59
CUX2O14529 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC24.96■■□□□ 1.59
CUX2O14529 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC24.96■■□□□ 1.59
CUX2O14529 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC24.96■■□□□ 1.59
CUX2O14529 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC24.96■■□□□ 1.59
CUX2O14529 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC24.96■■□□□ 1.59
CUX2O14529 ANKRD26P1-203ENST00000569528 966 ntBASIC24.96■■□□□ 1.59
CUX2O14529 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 AL591424.3-201ENST00000614278 872 ntBASIC24.96■■□□□ 1.59
CUX2O14529 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC24.96■■□□□ 1.59
CUX2O14529 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CUX2O14529 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CUX2O14529 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC24.96■■□□□ 1.59
CUX2O14529 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC24.96■■□□□ 1.59
CUX2O14529 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CUX2O14529 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
CUX2O14529 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC24.96■■□□□ 1.59
CUX2O14529 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC24.96■■□□□ 1.59
CUX2O14529 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC24.96■■□□□ 1.59
CUX2O14529 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC24.96■■□□□ 1.59
CUX2O14529 RN7SL530P-201ENST00000485097 298 ntBASIC24.96■■□□□ 1.59
CUX2O14529 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC24.96■■□□□ 1.59
CUX2O14529 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC24.96■■□□□ 1.59
CUX2O14529 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CUX2O14529 AC027601.3-201ENST00000622907 509 ntBASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms