Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 VDAC1P7-201ENST00000462417 847 ntBASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 CICP23-201ENST00000605013 2741 ntBASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.01□□□□□ -0.65
TRGV1A0A0A0MS02 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 TMPRSS11CP-201ENST00000453277 683 ntBASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 AC107373.2-201ENST00000607735 490 ntBASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRGV1A0A0A0MS02 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms