Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
RPH3AQ9Y2J0 AC134312.5-201ENST00000568031 1313 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 BCRP2-202ENST00000447763 634 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 AC119751.2-201ENST00000504529 210 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 BCRP6-201ENST00000510112 632 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 BCRP7-201ENST00000511549 544 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 AC068587.3-201ENST00000526613 355 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 SLC25A47P1-201ENST00000531577 414 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 SAMD11P1-201ENST00000571429 661 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 AL512343.1-201ENST00000605837 169 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 AL645728.2-202ENST00000641679 227 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 AC007787.1-201ENST00000588095 1583 ntBASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.92□□□□□ -0.18
RPH3AQ9Y2J0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AL158070.2-201ENST00000623713 1621 ntBASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 BAATP1-201ENST00000412284 1225 ntBASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AC018665.1-201ENST00000622927 1362 ntBASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPH3AQ9Y2J0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms