Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AC114812.1-204ENST00000449669 728 ntBASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 SEPHS1P7-201ENST00000452995 1177 ntBASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 SERBP1P5-201ENST00000510079 1181 ntBASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 ENPP7P5-201ENST00000541031 1031 ntBASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AL132655.2-201ENST00000596276 594 ntBASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AC133539.2-201ENST00000604757 467 ntBASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AL096865.1-201ENST00000606796 927 ntBASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AC007541.1-201ENST00000570282 1469 ntBASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS9D1Q9Y2B5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 KRT8P14-201ENST00000414254 1442 ntBASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 KRT8P22-201ENST00000562317 1415 ntBASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AL139094.1-201ENST00000405549 1188 ntBASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 HLA-K-203ENST00000430151 1046 ntBASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 UGT1A2P-201ENST00000454886 866 ntBASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AC019227.1-201ENST00000526902 510 ntBASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 AL359258.3-201ENST00000622910 2331 ntBASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS9D1Q9Y2B5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS9D1Q9Y2B5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS9D1Q9Y2B5 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS9D1Q9Y2B5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS9D1Q9Y2B5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS9D1Q9Y2B5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS9D1Q9Y2B5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS9D1Q9Y2B5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS9D1Q9Y2B5 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms