Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 HNRNPUP1-201ENST00000554987 333 ntBASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 AC010336.2-201ENST00000564226 506 ntBASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 MIR4313-201ENST00000580760 101 ntBASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 SPDYE22P-201ENST00000582158 798 ntBASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 AC097359.3-201ENST00000603982 1210 ntBASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 AC004233.3-201ENST00000607794 1269 ntBASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 AL662799.1-202ENST00000614205 422 ntBASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CALCOCO1Q9P1Z2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 TET3-201ENST00000305799 5174 ntTSL 5 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 AC025048.6-201ENST00000634326 1161 ntBASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 AL358472.5-202ENST00000641448 1267 ntBASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.61■□□□□ 0.25
CALCOCO1Q9P1Z2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.6■□□□□ 0.25
CALCOCO1Q9P1Z2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms