Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 OACYLP-201ENST00000417918 2208 ntBASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 AC022364.1-202ENST00000617468 2409 ntBASIC7.52□□□□□ -1.2
CDC42SE1Q9NRR8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 MX1-201ENST00000288383 2733 ntTSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 CYB5R3-202ENST00000361740 2938 ntTSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 INO80-211ENST00000616814 4272 ntTSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 ZMAT4-202ENST00000315769 2250 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 BTD-201ENST00000303498 2075 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 IGHV3-19-201ENST00000521488 291 ntBASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 DUX4L19-201ENST00000557448 1267 ntBASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 AGAP10P-201ENST00000454844 2418 ntBASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 PIGN-226ENST00000638591 2776 ntTSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 AC068896.1-201ENST00000494792 3422 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 LINC01159-201ENST00000433433 3103 ntTSL 2 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDC42SE1Q9NRR8 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 ADAM28-202ENST00000437154 2085 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 SYBU-222ENST00000529175 2717 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 LCMT1-AS2-201ENST00000562280 2601 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 AC018645.3-201ENST00000628855 2646 ntBASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 SNX33P1-201ENST00000592116 1762 ntBASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 CRYZ-205ENST00000417775 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 ACACB-202ENST00000377848 9247 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDC42SE1Q9NRR8 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms