Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC242376.2-201ENST00000619355 883 ntBASIC16.37■□□□□ 0.21
HIPK3Q9H422 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 AC009084.3-201ENST00000623356 437 ntBASIC16.37■□□□□ 0.21
HIPK3Q9H422 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.37■□□□□ 0.21
HIPK3Q9H422 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
HIPK3Q9H422 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIPK3Q9H422 CICP11-201ENST00000434745 2827 ntBASIC16.37■□□□□ 0.21
HIPK3Q9H422 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 AC009090.5-201ENST00000624886 2285 ntBASIC16.36■□□□□ 0.21
HIPK3Q9H422 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.36■□□□□ 0.21
HIPK3Q9H422 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 MIR6842-201ENST00000612539 65 ntBASIC16.36■□□□□ 0.21
HIPK3Q9H422 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 AL138725.1-201ENST00000407347 1314 ntBASIC16.36■□□□□ 0.21
HIPK3Q9H422 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.36■□□□□ 0.21
HIPK3Q9H422 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HIPK3Q9H422 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 RPL13AP19-201ENST00000434320 584 ntBASIC16.35■□□□□ 0.21
HIPK3Q9H422 AC026320.2-201ENST00000434379 478 ntBASIC16.35■□□□□ 0.21
HIPK3Q9H422 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.35■□□□□ 0.21
HIPK3Q9H422 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HIPK3Q9H422 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms