Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.24■□□□□ 0.03
WNT3AP56704 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
WNT3AP56704 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
WNT3AP56704 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.24■□□□□ 0.03
WNT3AP56704 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
WNT3AP56704 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.24■□□□□ 0.03
WNT3AP56704 AC007389.4-201ENST00000454674 793 ntBASIC15.24■□□□□ 0.03
WNT3AP56704 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.24■□□□□ 0.03
WNT3AP56704 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.24■□□□□ 0.03
WNT3AP56704 AC004466.1-201ENST00000599515 1080 ntBASIC15.24■□□□□ 0.03
WNT3AP56704 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
WNT3AP56704 AC145423.3-201ENST00000615987 467 ntBASIC15.24■□□□□ 0.03
WNT3AP56704 AL358472.5-202ENST00000641448 1267 ntBASIC15.24■□□□□ 0.03
WNT3AP56704 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
WNT3AP56704 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
WNT3AP56704 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.24■□□□□ 0.03
WNT3AP56704 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.24■□□□□ 0.03
WNT3AP56704 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.24■□□□□ 0.03
WNT3AP56704 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
WNT3AP56704 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.24■□□□□ 0.03
WNT3AP56704 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
WNT3AP56704 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
WNT3AP56704 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
WNT3AP56704 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
WNT3AP56704 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.23■□□□□ 0.03
WNT3AP56704 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.23■□□□□ 0.03
WNT3AP56704 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.23■□□□□ 0.03
WNT3AP56704 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
WNT3AP56704 AP001889.1-201ENST00000525414 633 ntBASIC15.23■□□□□ 0.03
WNT3AP56704 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
WNT3AP56704 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.23■□□□□ 0.03
WNT3AP56704 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 FAM45BP-202ENST00000592932 1624 ntBASIC15.23■□□□□ 0.03
WNT3AP56704 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.23■□□□□ 0.03
WNT3AP56704 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.23■□□□□ 0.03
WNT3AP56704 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
WNT3AP56704 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
WNT3AP56704 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
WNT3AP56704 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
WNT3AP56704 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.22■□□□□ 0.03
WNT3AP56704 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.22■□□□□ 0.03
WNT3AP56704 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
WNT3AP56704 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
WNT3AP56704 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
WNT3AP56704 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
WNT3AP56704 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
WNT3AP56704 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
WNT3AP56704 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
WNT3AP56704 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
WNT3AP56704 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
WNT3AP56704 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
WNT3AP56704 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.22■□□□□ 0.03
WNT3AP56704 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.22■□□□□ 0.03
WNT3AP56704 AL512384.1-201ENST00000406683 331 ntBASIC15.22■□□□□ 0.03
WNT3AP56704 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
WNT3AP56704 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.22■□□□□ 0.03
WNT3AP56704 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.22■□□□□ 0.03
WNT3AP56704 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
WNT3AP56704 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.22■□□□□ 0.03
WNT3AP56704 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms