Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDH13P55290 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH13P55290 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH13P55290 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH13P55290 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH13P55290 HLA-K-203ENST00000430151 1046 ntBASIC14.81□□□□□ -0.04
CDH13P55290 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH13P55290 AC004890.2-204ENST00000481968 304 ntBASIC14.81□□□□□ -0.04
CDH13P55290 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH13P55290 AC004790.1-201ENST00000612686 536 ntBASIC14.81□□□□□ -0.04
CDH13P55290 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDH13P55290 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CDH13P55290 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH13P55290 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDH13P55290 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CDH13P55290 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 CICP4-201ENST00000447359 2812 ntBASIC14.8□□□□□ -0.04
CDH13P55290 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH13P55290 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 AC055876.3-201ENST00000431496 288 ntBASIC14.8□□□□□ -0.04
CDH13P55290 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH13P55290 FAM86LP-201ENST00000478302 853 ntBASIC14.8□□□□□ -0.04
CDH13P55290 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.8□□□□□ -0.04
CDH13P55290 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.8□□□□□ -0.04
CDH13P55290 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH13P55290 AC104794.3-201ENST00000566840 1248 ntBASIC14.8□□□□□ -0.04
CDH13P55290 AC107373.2-201ENST00000607735 490 ntBASIC14.8□□□□□ -0.04
CDH13P55290 AC138649.4-201ENST00000612222 287 ntBASIC14.8□□□□□ -0.04
CDH13P55290 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH13P55290 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 AC093525.8-201ENST00000624099 1342 ntBASIC14.8□□□□□ -0.04
CDH13P55290 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 AC022144.1-201ENST00000602255 1580 ntBASIC14.8□□□□□ -0.04
CDH13P55290 AL138799.1-201ENST00000448213 1675 ntBASIC14.8□□□□□ -0.04
CDH13P55290 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDH13P55290 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH13P55290 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH13P55290 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDH13P55290 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH13P55290 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms