Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.08□□□□□ -0.16
PRKCAP17252 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.08□□□□□ -0.16
PRKCAP17252 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.08□□□□□ -0.16
PRKCAP17252 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.08□□□□□ -0.16
PRKCAP17252 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.08□□□□□ -0.16
PRKCAP17252 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.08□□□□□ -0.16
PRKCAP17252 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
PRKCAP17252 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PRKCAP17252 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.08□□□□□ -0.16
PRKCAP17252 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.07□□□□□ -0.16
PRKCAP17252 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PRKCAP17252 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.07□□□□□ -0.16
PRKCAP17252 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PRKCAP17252 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.07□□□□□ -0.16
PRKCAP17252 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PRKCAP17252 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
PRKCAP17252 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.07□□□□□ -0.16
PRKCAP17252 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.07□□□□□ -0.16
PRKCAP17252 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.07□□□□□ -0.16
PRKCAP17252 TERF1P3-201ENST00000505638 1227 ntBASIC14.07□□□□□ -0.16
PRKCAP17252 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.07□□□□□ -0.16
PRKCAP17252 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.07□□□□□ -0.16
PRKCAP17252 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.07□□□□□ -0.16
PRKCAP17252 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PRKCAP17252 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.07□□□□□ -0.16
PRKCAP17252 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.07□□□□□ -0.16
PRKCAP17252 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.07□□□□□ -0.16
PRKCAP17252 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.07□□□□□ -0.16
PRKCAP17252 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PRKCAP17252 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 AC073869.1-201ENST00000415574 2762 ntBASIC14.07□□□□□ -0.16
PRKCAP17252 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PRKCAP17252 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PRKCAP17252 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 AC148477.4-201ENST00000613430 1793 ntBASIC14.06□□□□□ -0.16
PRKCAP17252 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.06□□□□□ -0.16
PRKCAP17252 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PRKCAP17252 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 AC091951.1-201ENST00000512854 2465 ntBASIC14.06□□□□□ -0.16
PRKCAP17252 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PRKCAP17252 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PRKCAP17252 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.06□□□□□ -0.16
PRKCAP17252 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PRKCAP17252 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.06□□□□□ -0.16
PRKCAP17252 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PRKCAP17252 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PRKCAP17252 PIN1P1-201ENST00000412108 996 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms