Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 AC016694.1-201ENST00000434179 700 ntBASIC16.2■□□□□ 0.18
HLA-DRAP01903 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 AC007551.1-201ENST00000457394 519 ntBASIC16.2■□□□□ 0.18
HLA-DRAP01903 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 ECM1P1-201ENST00000604092 1279 ntBASIC16.2■□□□□ 0.18
HLA-DRAP01903 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 AC132938.4-201ENST00000623835 848 ntBASIC16.2■□□□□ 0.18
HLA-DRAP01903 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 AC007686.3-201ENST00000619017 3487 ntBASIC16.2■□□□□ 0.18
HLA-DRAP01903 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRAP01903 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.2■□□□□ 0.18
HLA-DRAP01903 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 AL390755.1-201ENST00000623716 2027 ntBASIC16.19■□□□□ 0.18
HLA-DRAP01903 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 TPM3P8-201ENST00000330554 643 ntBASIC16.19■□□□□ 0.18
HLA-DRAP01903 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 FAM197Y7-201ENST00000432892 766 ntBASIC16.19■□□□□ 0.18
HLA-DRAP01903 KRT43P-201ENST00000434019 910 ntBASIC16.19■□□□□ 0.18
HLA-DRAP01903 U91328.1-201ENST00000437528 223 ntBASIC16.19■□□□□ 0.18
HLA-DRAP01903 MESTP3-201ENST00000503460 968 ntBASIC16.19■□□□□ 0.18
HLA-DRAP01903 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DRAP01903 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRAP01903 AC063926.2-201ENST00000623766 1308 ntBASIC16.19■□□□□ 0.18
HLA-DRAP01903 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 AC003102.2-201ENST00000589195 1469 ntBASIC16.18■□□□□ 0.18
HLA-DRAP01903 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRAP01903 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.18■□□□□ 0.18
HLA-DRAP01903 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 KRT90P-201ENST00000549264 1064 ntBASIC16.18■□□□□ 0.18
HLA-DRAP01903 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-DRAP01903 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms