Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.68□□□□□ -0.54
TRBV12-3P01733 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 AC112492.5-201ENST00000421897 457 ntBASIC11.68□□□□□ -0.54
TRBV12-3P01733 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 AL590640.2-201ENST00000457038 527 ntBASIC11.68□□□□□ -0.54
TRBV12-3P01733 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRBV12-3P01733 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.68□□□□□ -0.54
TRBV12-3P01733 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 FGD5P1-202ENST00000614866 2498 ntBASIC11.67□□□□□ -0.54
TRBV12-3P01733 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 AC018529.2-202ENST00000611482 3087 ntBASIC11.67□□□□□ -0.54
TRBV12-3P01733 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.67□□□□□ -0.54
TRBV12-3P01733 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 KRT17P8-201ENST00000540749 863 ntBASIC11.67□□□□□ -0.54
TRBV12-3P01733 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRBV12-3P01733 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRBV12-3P01733 CICP23-201ENST00000605013 2741 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms