Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-CO1P00395 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-CO1P00395 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.51■□□□□ 0.07
MT-CO1P00395 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.51■□□□□ 0.07
MT-CO1P00395 AC099336.1-201ENST00000417053 1171 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 CNN2P8-201ENST00000421872 913 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MT-CO1P00395 FAM197Y7-201ENST00000432892 766 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 C2orf27AP3-201ENST00000434123 579 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 AC007274.1-201ENST00000439805 662 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
MT-CO1P00395 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-CO1P00395 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.51■□□□□ 0.07
MT-CO1P00395 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.51■□□□□ 0.07
MT-CO1P00395 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-CO1P00395 AP000845.1-201ENST00000581677 2131 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.51■□□□□ 0.07
MT-CO1P00395 AL354718.3-201ENST00000616414 581 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 CR382287.1-201ENST00000623954 586 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-CO1P00395 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 LRRC59-203ENST00000576448 1531 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
MT-CO1P00395 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-CO1P00395 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MT-CO1P00395 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MT-CO1P00395 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.51■□□□□ 0.07
MT-CO1P00395 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-CO1P00395 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-CO1P00395 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
MT-CO1P00395 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MT-CO1P00395 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-CO1P00395 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MT-CO1P00395 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 AC126365.1-201ENST00000578585 1514 ntBASIC15.5■□□□□ 0.07
MT-CO1P00395 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.5■□□□□ 0.07
MT-CO1P00395 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-CO1P00395 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
MT-CO1P00395 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-CO1P00395 AC026954.1-201ENST00000429771 1293 ntBASIC15.5■□□□□ 0.07
MT-CO1P00395 RPS2P32-201ENST00000439199 892 ntBASIC15.5■□□□□ 0.07
MT-CO1P00395 BNIP3P42-201ENST00000454982 569 ntBASIC15.5■□□□□ 0.07
MT-CO1P00395 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.5■□□□□ 0.07
MT-CO1P00395 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.5■□□□□ 0.07
MT-CO1P00395 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-CO1P00395 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
MT-CO1P00395 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.5■□□□□ 0.07
MT-CO1P00395 BNIP3P29-201ENST00000598302 571 ntBASIC15.5■□□□□ 0.07
MT-CO1P00395 AC011447.5-201ENST00000616168 564 ntBASIC15.5■□□□□ 0.07
MT-CO1P00395 MIR6752-201ENST00000618442 71 ntBASIC15.5■□□□□ 0.07
MT-CO1P00395 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-CO1P00395 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-CO1P00395 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-CO1P00395 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MT-CO1P00395 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-CO1P00395 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MT-CO1P00395 OR2I1P-210ENST00000642037 4691 ntBASIC15.5■□□□□ 0.07
MT-CO1P00395 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MT-CO1P00395 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-CO1P00395 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
MT-CO1P00395 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
MT-CO1P00395 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms