Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC18.35■□□□□ 0.53
RGPD3A6NKT7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 ZNF877P-201ENST00000437614 612 ntBASIC18.35■□□□□ 0.53
RGPD3A6NKT7 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.35■□□□□ 0.53
RGPD3A6NKT7 RN7SL602P-201ENST00000578326 324 ntBASIC18.35■□□□□ 0.53
RGPD3A6NKT7 MIR4746-201ENST00000579802 71 ntBASIC18.35■□□□□ 0.53
RGPD3A6NKT7 MIR4254-201ENST00000581063 76 ntBASIC18.35■□□□□ 0.53
RGPD3A6NKT7 RN7SL718P-201ENST00000581254 303 ntBASIC18.35■□□□□ 0.53
RGPD3A6NKT7 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 HPX-213ENST00000615166 826 ntTSL 5 BASIC18.35■□□□□ 0.53
RGPD3A6NKT7 SSR4P1-203ENST00000599569 2260 ntBASIC18.35■□□□□ 0.53
RGPD3A6NKT7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 AP000244.1-201ENST00000424582 201 ntBASIC18.34■□□□□ 0.53
RGPD3A6NKT7 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 URAHP-205ENST00000610227 398 ntBASIC18.34■□□□□ 0.53
RGPD3A6NKT7 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC18.34■□□□□ 0.53
RGPD3A6NKT7 AL008638.4-201ENST00000624792 1315 ntBASIC18.34■□□□□ 0.53
RGPD3A6NKT7 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RGPD3A6NKT7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 FAU-201ENST00000279259 461 ntTSL 2 BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 ABCD1P4-201ENST00000399687 604 ntBASIC18.33■□□□□ 0.53
RGPD3A6NKT7 AC006987.1-201ENST00000413610 527 ntBASIC18.33■□□□□ 0.53
RGPD3A6NKT7 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 GALP-202ENST00000440823 889 ntTSL 5 BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 AC084262.1-201ENST00000567818 751 ntBASIC18.33■□□□□ 0.53
RGPD3A6NKT7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 CSTP2-201ENST00000610599 398 ntBASIC18.33■□□□□ 0.53
RGPD3A6NKT7 AC006986.1-201ENST00000612764 241 ntBASIC18.33■□□□□ 0.53
RGPD3A6NKT7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
RGPD3A6NKT7 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RGPD3A6NKT7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RGPD3A6NKT7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.33■□□□□ 0.52
RGPD3A6NKT7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RGPD3A6NKT7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RGPD3A6NKT7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.33■□□□□ 0.52
RGPD3A6NKT7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RGPD3A6NKT7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RGPD3A6NKT7 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms