Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 AL122018.1-201ENST00000446607 2310 ntBASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 DFFBP1-201ENST00000433250 979 ntBASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 SPTLC1P1-201ENST00000447199 261 ntBASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 TSPY16P-201ENST00000449843 468 ntBASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 UGT1A2P-201ENST00000454886 866 ntBASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 RN7SL399P-201ENST00000471648 279 ntBASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 SPCS2P1-201ENST00000561636 679 ntBASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 AL096865.1-201ENST00000606796 927 ntBASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 SLC7A15P-201ENST00000424028 1363 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 AL391825.1-201ENST00000457671 1364 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 AC006504.5-208ENST00000588784 2401 ntBASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DRB4X5D2U9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms