Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 PTENP1-202ENST00000532280 3996 ntBASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 REXO1L1P-202ENST00000608646 1974 ntBASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 AZGP1P1-201ENST00000411909 902 ntBASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 RN7SL837P-201ENST00000463010 287 ntBASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 IGHV3-71-201ENST00000523324 359 ntBASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 AC055876.2-201ENST00000531834 546 ntBASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 BNIP3P1-202ENST00000550043 1585 ntBASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
DDX49Q9Y6V7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 AL391825.1-201ENST00000457671 1364 ntBASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 AC098614.1-201ENST00000368528 745 ntBASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 AC087499.6-201ENST00000411576 835 ntBASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 AC112492.5-201ENST00000421897 457 ntBASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.23■□□□□ 0.51
DDX49Q9Y6V7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms