Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.89□□□□□ -0.19
LRFN1Q9P244 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LRFN1Q9P244 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRFN1Q9P244 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LRFN1Q9P244 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.89□□□□□ -0.19
LRFN1Q9P244 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 REXO1L4P-201ENST00000605109 1937 ntBASIC13.88□□□□□ -0.19
LRFN1Q9P244 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 C2orf69P2-201ENST00000562032 1123 ntBASIC13.88□□□□□ -0.19
LRFN1Q9P244 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 DUX4L47-201ENST00000566374 394 ntBASIC13.88□□□□□ -0.19
LRFN1Q9P244 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 AC084346.2-201ENST00000607097 949 ntBASIC13.88□□□□□ -0.19
LRFN1Q9P244 AL118558.3-201ENST00000607414 1079 ntBASIC13.88□□□□□ -0.19
LRFN1Q9P244 MIR6787-201ENST00000616675 61 ntBASIC13.88□□□□□ -0.19
LRFN1Q9P244 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 PAUPAR-201ENST00000630360 2965 ntBASIC13.88□□□□□ -0.19
LRFN1Q9P244 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LRFN1Q9P244 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.88□□□□□ -0.19
LRFN1Q9P244 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC007969.1-201ENST00000433675 447 ntBASIC13.87□□□□□ -0.19
LRFN1Q9P244 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 FTLP10-202ENST00000505798 471 ntBASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 RN7SL713P-201ENST00000582127 302 ntBASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC244093.1-201ENST00000610837 814 ntBASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.87□□□□□ -0.19
LRFN1Q9P244 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms