Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HACD3Q9P035 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HACD3Q9P035 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.34■□□□□ 0.05
HACD3Q9P035 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
HACD3Q9P035 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HACD3Q9P035 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HACD3Q9P035 LINC00528-201ENST00000600723 2160 ntBASIC15.34■□□□□ 0.05
HACD3Q9P035 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.33■□□□□ 0.05
HACD3Q9P035 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
HACD3Q9P035 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HACD3Q9P035 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HACD3Q9P035 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
HACD3Q9P035 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HACD3Q9P035 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.33■□□□□ 0.05
HACD3Q9P035 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HACD3Q9P035 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.33■□□□□ 0.04
HACD3Q9P035 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HACD3Q9P035 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HACD3Q9P035 AL139094.1-201ENST00000405549 1188 ntBASIC15.33■□□□□ 0.04
HACD3Q9P035 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.33■□□□□ 0.04
HACD3Q9P035 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.33■□□□□ 0.04
HACD3Q9P035 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.33■□□□□ 0.04
HACD3Q9P035 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.33■□□□□ 0.04
HACD3Q9P035 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
HACD3Q9P035 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.33■□□□□ 0.04
HACD3Q9P035 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HACD3Q9P035 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
HACD3Q9P035 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
HACD3Q9P035 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.33■□□□□ 0.04
HACD3Q9P035 AC009486.1-201ENST00000569860 813 ntBASIC15.33■□□□□ 0.04
HACD3Q9P035 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HACD3Q9P035 AP005019.2-201ENST00000615104 511 ntBASIC15.33■□□□□ 0.04
HACD3Q9P035 AC025048.6-201ENST00000634326 1161 ntBASIC15.33■□□□□ 0.04
HACD3Q9P035 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.33■□□□□ 0.04
HACD3Q9P035 AL603764.1-201ENST00000636452 321 ntBASIC15.33■□□□□ 0.04
HACD3Q9P035 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
HACD3Q9P035 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HACD3Q9P035 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.33■□□□□ 0.04
HACD3Q9P035 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
HACD3Q9P035 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.33■□□□□ 0.04
HACD3Q9P035 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 AC026748.1-201ENST00000624349 3251 ntBASIC15.33■□□□□ 0.04
HACD3Q9P035 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HACD3Q9P035 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.33■□□□□ 0.04
HACD3Q9P035 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 AC007191.1-201ENST00000623179 2995 ntBASIC15.33■□□□□ 0.04
HACD3Q9P035 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.33■□□□□ 0.04
HACD3Q9P035 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HACD3Q9P035 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HACD3Q9P035 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HACD3Q9P035 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.32■□□□□ 0.04
HACD3Q9P035 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HACD3Q9P035 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
HACD3Q9P035 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HACD3Q9P035 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HACD3Q9P035 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HACD3Q9P035 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
HACD3Q9P035 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
HACD3Q9P035 AC023908.3-201ENST00000564211 3047 ntBASIC15.32■□□□□ 0.04
HACD3Q9P035 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HACD3Q9P035 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HACD3Q9P035 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.32■□□□□ 0.04
HACD3Q9P035 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HACD3Q9P035 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HACD3Q9P035 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.32■□□□□ 0.04
HACD3Q9P035 AC011495.1-201ENST00000498085 584 ntBASIC15.32■□□□□ 0.04
HACD3Q9P035 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HACD3Q9P035 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HACD3Q9P035 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.32■□□□□ 0.04
HACD3Q9P035 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.32■□□□□ 0.04
HACD3Q9P035 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.32■□□□□ 0.04
HACD3Q9P035 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.32■□□□□ 0.04
HACD3Q9P035 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HACD3Q9P035 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.32■□□□□ 0.04
HACD3Q9P035 AC005252.2-201ENST00000624630 1141 ntBASIC15.32■□□□□ 0.04
HACD3Q9P035 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HACD3Q9P035 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HACD3Q9P035 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.32■□□□□ 0.04
HACD3Q9P035 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms