Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC131206.1-201ENST00000538078 1211 ntBASIC16.13■□□□□ 0.17
SIX2Q9NPC8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 AC092364.2-202ENST00000597012 1073 ntBASIC16.13■□□□□ 0.17
SIX2Q9NPC8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 AL138709.1-201ENST00000614840 1693 ntBASIC16.13■□□□□ 0.17
SIX2Q9NPC8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX2Q9NPC8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 INE2-201ENST00000630399 1874 ntBASIC16.12■□□□□ 0.17
SIX2Q9NPC8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 AC136759.1-202ENST00000530858 2194 ntBASIC16.12■□□□□ 0.17
SIX2Q9NPC8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 ACTG1P3-201ENST00000431775 1114 ntBASIC16.12■□□□□ 0.17
SIX2Q9NPC8 AC012441.1-201ENST00000446669 685 ntBASIC16.12■□□□□ 0.17
SIX2Q9NPC8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 AC009486.1-201ENST00000569860 813 ntBASIC16.12■□□□□ 0.17
SIX2Q9NPC8 MIR5189-201ENST00000577370 114 ntBASIC16.12■□□□□ 0.17
SIX2Q9NPC8 AC145423.3-201ENST00000615987 467 ntBASIC16.12■□□□□ 0.17
SIX2Q9NPC8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 CLUHP2-201ENST00000426660 1303 ntBASIC16.12■□□□□ 0.17
SIX2Q9NPC8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIX2Q9NPC8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 BAATP1-201ENST00000412284 1225 ntBASIC16.11■□□□□ 0.17
SIX2Q9NPC8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SIX2Q9NPC8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.1■□□□□ 0.17
SIX2Q9NPC8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX2Q9NPC8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SIX2Q9NPC8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX2Q9NPC8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX2Q9NPC8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SIX2Q9NPC8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms