Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.05■□□□□ 0.16
DDX1Q92499 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.05■□□□□ 0.16
DDX1Q92499 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
DDX1Q92499 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.05■□□□□ 0.16
DDX1Q92499 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.05■□□□□ 0.16
DDX1Q92499 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
DDX1Q92499 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.05■□□□□ 0.16
DDX1Q92499 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.05■□□□□ 0.16
DDX1Q92499 RNA5SP412-201ENST00000516234 123 ntBASIC16.05■□□□□ 0.16
DDX1Q92499 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
DDX1Q92499 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.05■□□□□ 0.16
DDX1Q92499 BTNL10-201ENST00000595971 695 ntBASIC16.05■□□□□ 0.16
DDX1Q92499 AC008735.3-201ENST00000596646 500 ntBASIC16.05■□□□□ 0.16
DDX1Q92499 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.05■□□□□ 0.16
DDX1Q92499 AL033527.5-201ENST00000641382 801 ntBASIC16.05■□□□□ 0.16
DDX1Q92499 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.05■□□□□ 0.16
DDX1Q92499 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.05■□□□□ 0.16
DDX1Q92499 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
DDX1Q92499 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.05■□□□□ 0.16
DDX1Q92499 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.05■□□□□ 0.16
DDX1Q92499 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.05■□□□□ 0.16
DDX1Q92499 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.04■□□□□ 0.16
DDX1Q92499 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.04■□□□□ 0.16
DDX1Q92499 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 SNX18-202ENST00000343017 3140 ntBASIC16.04■□□□□ 0.16
DDX1Q92499 AL354702.1-201ENST00000442006 1960 ntBASIC16.04■□□□□ 0.16
DDX1Q92499 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
DDX1Q92499 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.04■□□□□ 0.16
DDX1Q92499 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.04■□□□□ 0.16
DDX1Q92499 TMEM14DP-201ENST00000422205 345 ntBASIC16.04■□□□□ 0.16
DDX1Q92499 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.04■□□□□ 0.16
DDX1Q92499 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.04■□□□□ 0.16
DDX1Q92499 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.04■□□□□ 0.16
DDX1Q92499 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.04■□□□□ 0.16
DDX1Q92499 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DDX1Q92499 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.04■□□□□ 0.16
DDX1Q92499 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DDX1Q92499 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DDX1Q92499 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.04■□□□□ 0.16
DDX1Q92499 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
DDX1Q92499 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.04■□□□□ 0.16
DDX1Q92499 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DDX1Q92499 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DDX1Q92499 BX640514.1-201ENST00000583223 1918 ntBASIC16.04■□□□□ 0.16
DDX1Q92499 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
DDX1Q92499 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
DDX1Q92499 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
DDX1Q92499 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
DDX1Q92499 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
DDX1Q92499 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
DDX1Q92499 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DDX1Q92499 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms