Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 AL023803.2-201ENST00000620080 638 ntBASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 AJ011931.1-201ENST00000618749 2492 ntBASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NEDD1Q8NHV4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 PUDPP3-201ENST00000445368 636 ntBASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 SERPINA13P-202ENST00000478994 924 ntBASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 AC091804.1-201ENST00000486888 567 ntBASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 AC103810.3-201ENST00000583567 96 ntBASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 AC132192.2-201ENST00000596206 1147 ntBASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.44■□□□□ 0.38
NEDD1Q8NHV4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 TUBB8P8-201ENST00000458717 1058 ntBASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 AC100827.2-201ENST00000563214 1194 ntBASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 AC005324.6-201ENST00000587972 613 ntBASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 AL451050.2-201ENST00000606967 682 ntBASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
NEDD1Q8NHV4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms