Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 TSPY19P-201ENST00000418461 509 ntBASIC12.62□□□□□ -0.39
ZNF546Q86UE3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 RPS2P1-201ENST00000434010 821 ntBASIC12.62□□□□□ -0.39
ZNF546Q86UE3 TSPY18P-201ENST00000441642 509 ntBASIC12.62□□□□□ -0.39
ZNF546Q86UE3 CXCL1P1-201ENST00000502804 216 ntBASIC12.62□□□□□ -0.39
ZNF546Q86UE3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 AC008735.5-201ENST00000623544 497 ntBASIC12.62□□□□□ -0.39
ZNF546Q86UE3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ZNF546Q86UE3 AC023794.5-201ENST00000564380 2157 ntBASIC12.62□□□□□ -0.39
ZNF546Q86UE3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 CICP16-201ENST00000502609 2813 ntBASIC12.61□□□□□ -0.39
ZNF546Q86UE3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AC007787.1-201ENST00000588095 1583 ntBASIC12.61□□□□□ -0.39
ZNF546Q86UE3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AC012508.2-201ENST00000567613 1472 ntBASIC12.61□□□□□ -0.39
ZNF546Q86UE3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AL513480.1-201ENST00000451731 511 ntBASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AC108073.2-201ENST00000464002 357 ntBASIC12.61□□□□□ -0.39
ZNF546Q86UE3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AC022447.6-201ENST00000515522 438 ntBASIC12.61□□□□□ -0.39
ZNF546Q86UE3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AC105339.3-201ENST00000560043 636 ntBASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 PRELID1P1-202ENST00000567272 903 ntBASIC12.61□□□□□ -0.39
ZNF546Q86UE3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AL078644.1-201ENST00000609881 752 ntBASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms