Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FREM1Q5H8C1 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FREM1Q5H8C1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.22□□□□□ -0.29
FREM1Q5H8C1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.22□□□□□ -0.29
FREM1Q5H8C1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
FREM1Q5H8C1 CICP24-201ENST00000605464 2705 ntBASIC13.21□□□□□ -0.29
FREM1Q5H8C1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 AC103702.1-201ENST00000548801 2630 ntBASIC13.21□□□□□ -0.29
FREM1Q5H8C1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 GOLGA2P4-201ENST00000441462 777 ntBASIC13.21□□□□□ -0.29
FREM1Q5H8C1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 AC022616.1-201ENST00000518688 554 ntBASIC13.21□□□□□ -0.29
FREM1Q5H8C1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FREM1Q5H8C1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 AC099548.2-209ENST00000480264 625 ntBASIC13.21□□□□□ -0.3
FREM1Q5H8C1 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 LINC01101-201ENST00000622953 1884 ntBASIC13.21□□□□□ -0.3
FREM1Q5H8C1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
FREM1Q5H8C1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 AC097359.2-201ENST00000604992 2389 ntBASIC13.2□□□□□ -0.3
FREM1Q5H8C1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 AC006033.1-201ENST00000440505 426 ntBASIC13.2□□□□□ -0.3
FREM1Q5H8C1 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.2□□□□□ -0.3
FREM1Q5H8C1 AL008638.5-201ENST00000623814 1298 ntBASIC13.2□□□□□ -0.3
FREM1Q5H8C1 AC002472.3-201ENST00000640124 621 ntBASIC13.2□□□□□ -0.3
FREM1Q5H8C1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms