Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CNTNAP1P78357 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTNAP1P78357 MIR557-201ENST00000385239 98 ntBASIC17.66■□□□□ 0.42
CNTNAP1P78357 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTNAP1P78357 AC004522.1-201ENST00000419978 654 ntBASIC17.66■□□□□ 0.42
CNTNAP1P78357 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP1P78357 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CNTNAP1P78357 IGHEP1-201ENST00000521393 651 ntBASIC17.66■□□□□ 0.42
CNTNAP1P78357 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP1P78357 FAM86B3P-203ENST00000523992 854 ntBASIC17.66■□□□□ 0.42
CNTNAP1P78357 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.66■□□□□ 0.42
CNTNAP1P78357 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP1P78357 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTNAP1P78357 AC093752.3-201ENST00000567343 901 ntBASIC17.66■□□□□ 0.42
CNTNAP1P78357 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CNTNAP1P78357 LINC01783-202ENST00000614408 828 ntBASIC17.66■□□□□ 0.42
CNTNAP1P78357 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CNTNAP1P78357 BX284668.2-205ENST00000619677 828 ntBASIC17.66■□□□□ 0.42
CNTNAP1P78357 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 AC004554.1-201ENST00000422830 1468 ntBASIC17.65■□□□□ 0.42
CNTNAP1P78357 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 AL157407.1-201ENST00000435784 904 ntBASIC17.65■□□□□ 0.42
CNTNAP1P78357 AL645933.1-201ENST00000440087 609 ntBASIC17.65■□□□□ 0.42
CNTNAP1P78357 CICP12-201ENST00000455801 843 ntBASIC17.65■□□□□ 0.42
CNTNAP1P78357 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 PEBP1P2-201ENST00000603980 558 ntBASIC17.65■□□□□ 0.42
CNTNAP1P78357 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.65■□□□□ 0.42
CNTNAP1P78357 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP1P78357 PCDHA1-201ENST00000378133 2726 ntBASIC17.65■□□□□ 0.42
CNTNAP1P78357 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.64■□□□□ 0.42
CNTNAP1P78357 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CNTNAP1P78357 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 AC020658.6-201ENST00000623564 1870 ntBASIC17.64■□□□□ 0.41
CNTNAP1P78357 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 TLE1P1-201ENST00000422965 589 ntBASIC17.64■□□□□ 0.41
CNTNAP1P78357 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 AC244197.1-201ENST00000456494 951 ntBASIC17.64■□□□□ 0.41
CNTNAP1P78357 RN7SL81P-201ENST00000493781 261 ntBASIC17.64■□□□□ 0.41
CNTNAP1P78357 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 AL157813.1-201ENST00000612996 587 ntBASIC17.64■□□□□ 0.41
CNTNAP1P78357 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNTNAP1P78357 AC112693.3-201ENST00000624819 1983 ntBASIC17.64■□□□□ 0.41
CNTNAP1P78357 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.64■□□□□ 0.41
CNTNAP1P78357 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP1P78357 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP1P78357 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.63■□□□□ 0.41
CNTNAP1P78357 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms