Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.65□□□□□ -0.22
SUMO3P55854 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.65□□□□□ -0.22
SUMO3P55854 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.65□□□□□ -0.22
SUMO3P55854 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.65□□□□□ -0.22
SUMO3P55854 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SUMO3P55854 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.65□□□□□ -0.22
SUMO3P55854 AC005034.1-201ENST00000426657 489 ntBASIC13.65□□□□□ -0.22
SUMO3P55854 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SUMO3P55854 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.65□□□□□ -0.22
SUMO3P55854 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 AC007551.1-201ENST00000457394 519 ntBASIC13.65□□□□□ -0.22
SUMO3P55854 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SUMO3P55854 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.65□□□□□ -0.22
SUMO3P55854 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.65□□□□□ -0.22
SUMO3P55854 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.65□□□□□ -0.22
SUMO3P55854 AC138696.2-201ENST00000607376 223 ntBASIC13.65□□□□□ -0.22
SUMO3P55854 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.65□□□□□ -0.22
SUMO3P55854 AL162274.1-201ENST00000617191 1098 ntBASIC13.65□□□□□ -0.22
SUMO3P55854 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SUMO3P55854 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SUMO3P55854 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.65□□□□□ -0.22
SUMO3P55854 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.65□□□□□ -0.22
SUMO3P55854 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SUMO3P55854 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.65□□□□□ -0.22
SUMO3P55854 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SUMO3P55854 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SUMO3P55854 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
SUMO3P55854 CLUHP2-201ENST00000426660 1303 ntBASIC13.64□□□□□ -0.23
SUMO3P55854 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.64□□□□□ -0.23
SUMO3P55854 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 AC099063.4-201ENST00000641099 1602 ntBASIC13.64□□□□□ -0.23
SUMO3P55854 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 AL390755.1-201ENST00000623716 2027 ntBASIC13.64□□□□□ -0.23
SUMO3P55854 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.64□□□□□ -0.23
SUMO3P55854 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.64□□□□□ -0.23
SUMO3P55854 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
SUMO3P55854 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SUMO3P55854 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SUMO3P55854 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.64□□□□□ -0.23
SUMO3P55854 CNN2P8-201ENST00000421872 913 ntBASIC13.64□□□□□ -0.23
SUMO3P55854 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.64□□□□□ -0.23
SUMO3P55854 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.64□□□□□ -0.23
SUMO3P55854 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.64□□□□□ -0.23
SUMO3P55854 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
SUMO3P55854 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.64□□□□□ -0.23
SUMO3P55854 AC004466.1-201ENST00000599515 1080 ntBASIC13.64□□□□□ -0.23
SUMO3P55854 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.64□□□□□ -0.23
SUMO3P55854 AL035252.4-201ENST00000624174 288 ntBASIC13.64□□□□□ -0.23
SUMO3P55854 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.64□□□□□ -0.23
SUMO3P55854 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.64□□□□□ -0.23
SUMO3P55854 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.64□□□□□ -0.23
SUMO3P55854 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SUMO3P55854 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SUMO3P55854 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SUMO3P55854 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SUMO3P55854 AP000593.2-201ENST00000542775 1433 ntBASIC13.64□□□□□ -0.23
SUMO3P55854 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SUMO3P55854 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SUMO3P55854 CICP14-201ENST00000629111 2732 ntBASIC13.63□□□□□ -0.23
SUMO3P55854 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SUMO3P55854 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SUMO3P55854 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SUMO3P55854 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.63□□□□□ -0.23
SUMO3P55854 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SUMO3P55854 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SUMO3P55854 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SUMO3P55854 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SUMO3P55854 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms