Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SNCAP37840 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 YBX2P1-201ENST00000394192 760 ntBASIC12.52□□□□□ -0.41
SNCAP37840 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 RPL5P21-201ENST00000404620 815 ntBASIC12.52□□□□□ -0.41
SNCAP37840 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.52□□□□□ -0.41
SNCAP37840 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.52□□□□□ -0.41
SNCAP37840 AL592309.1-201ENST00000443127 649 ntBASIC12.52□□□□□ -0.41
SNCAP37840 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.52□□□□□ -0.41
SNCAP37840 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.52□□□□□ -0.41
SNCAP37840 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SNCAP37840 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.52□□□□□ -0.41
SNCAP37840 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.52□□□□□ -0.41
SNCAP37840 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.52□□□□□ -0.41
SNCAP37840 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
SNCAP37840 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 AC055717.3-201ENST00000622967 595 ntBASIC12.52□□□□□ -0.41
SNCAP37840 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SNCAP37840 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SNCAP37840 AP3S2-216ENST00000617003 1561 ntBASIC12.52□□□□□ -0.41
SNCAP37840 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SNCAP37840 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SNCAP37840 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SNCAP37840 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SNCAP37840 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.51□□□□□ -0.41
SNCAP37840 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.51□□□□□ -0.41
SNCAP37840 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.51□□□□□ -0.41
SNCAP37840 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.51□□□□□ -0.41
SNCAP37840 MIR940-201ENST00000401276 94 ntBASIC12.51□□□□□ -0.41
SNCAP37840 EEF1DP4-201ENST00000446006 880 ntBASIC12.51□□□□□ -0.41
SNCAP37840 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.51□□□□□ -0.41
SNCAP37840 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 KRT8P48-201ENST00000515599 1220 ntBASIC12.51□□□□□ -0.41
SNCAP37840 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.51□□□□□ -0.41
SNCAP37840 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.51□□□□□ -0.41
SNCAP37840 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.51□□□□□ -0.41
SNCAP37840 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.51□□□□□ -0.41
SNCAP37840 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.51□□□□□ -0.41
SNCAP37840 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.51□□□□□ -0.41
SNCAP37840 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
SNCAP37840 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.51□□□□□ -0.41
SNCAP37840 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SNCAP37840 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.51□□□□□ -0.41
SNCAP37840 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SNCAP37840 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms