Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 AC018442.1-201ENST00000421439 2061 ntBASIC14.53□□□□□ -0.08
PTX3P26022 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.53□□□□□ -0.08
PTX3P26022 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PTX3P26022 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PTX3P26022 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
PTX3P26022 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.52□□□□□ -0.08
PTX3P26022 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.52□□□□□ -0.08
PTX3P26022 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.52□□□□□ -0.08
PTX3P26022 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.52□□□□□ -0.08
PTX3P26022 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
PTX3P26022 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 KRT8P14-201ENST00000414254 1442 ntBASIC14.52□□□□□ -0.08
PTX3P26022 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PTX3P26022 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.52□□□□□ -0.08
PTX3P26022 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.52□□□□□ -0.09
PTX3P26022 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.52□□□□□ -0.09
PTX3P26022 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.52□□□□□ -0.09
PTX3P26022 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.52□□□□□ -0.09
PTX3P26022 AC022616.1-201ENST00000518688 554 ntBASIC14.52□□□□□ -0.09
PTX3P26022 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
PTX3P26022 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.52□□□□□ -0.09
PTX3P26022 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.52□□□□□ -0.09
PTX3P26022 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.52□□□□□ -0.09
PTX3P26022 AP005019.2-201ENST00000615104 511 ntBASIC14.52□□□□□ -0.09
PTX3P26022 AL603764.1-201ENST00000636452 321 ntBASIC14.52□□□□□ -0.09
PTX3P26022 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.52□□□□□ -0.09
PTX3P26022 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.52□□□□□ -0.09
PTX3P26022 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PTX3P26022 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PTX3P26022 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
PTX3P26022 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
PTX3P26022 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PTX3P26022 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.51□□□□□ -0.09
PTX3P26022 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PTX3P26022 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PTX3P26022 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.51□□□□□ -0.09
PTX3P26022 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.51□□□□□ -0.09
PTX3P26022 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PTX3P26022 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.51□□□□□ -0.09
PTX3P26022 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.51□□□□□ -0.09
PTX3P26022 AC104581.4-201ENST00000623126 3052 ntBASIC14.51□□□□□ -0.09
PTX3P26022 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.51□□□□□ -0.09
PTX3P26022 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
PTX3P26022 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
PTX3P26022 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PTX3P26022 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.51□□□□□ -0.09
PTX3P26022 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PTX3P26022 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.51□□□□□ -0.09
PTX3P26022 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 AL162726.2-201ENST00000438986 1017 ntBASIC14.51□□□□□ -0.09
PTX3P26022 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.51□□□□□ -0.09
PTX3P26022 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PTX3P26022 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.51□□□□□ -0.09
PTX3P26022 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PTX3P26022 TP53TG3HP-202ENST00000569755 579 ntBASIC14.51□□□□□ -0.09
PTX3P26022 CTBP2P3-201ENST00000585629 1255 ntBASIC14.51□□□□□ -0.09
PTX3P26022 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.51□□□□□ -0.09
PTX3P26022 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.51□□□□□ -0.09
PTX3P26022 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
PTX3P26022 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms