Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CAPN3P20807 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CAPN3P20807 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CAPN3P20807 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 KRT18P43-201ENST00000469825 1281 ntBASIC14.61□□□□□ -0.07
CAPN3P20807 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.61□□□□□ -0.07
CAPN3P20807 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.61□□□□□ -0.07
CAPN3P20807 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CAPN3P20807 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.61□□□□□ -0.07
CAPN3P20807 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CAPN3P20807 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.61□□□□□ -0.07
CAPN3P20807 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.61□□□□□ -0.07
CAPN3P20807 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CAPN3P20807 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.61□□□□□ -0.07
CAPN3P20807 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN3P20807 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CAPN3P20807 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CAPN3P20807 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CAPN3P20807 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.6□□□□□ -0.07
CAPN3P20807 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CAPN3P20807 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CAPN3P20807 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.6□□□□□ -0.07
CAPN3P20807 AC004890.2-204ENST00000481968 304 ntBASIC14.6□□□□□ -0.07
CAPN3P20807 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.6□□□□□ -0.07
CAPN3P20807 IGHV3-71-201ENST00000523324 359 ntBASIC14.6□□□□□ -0.07
CAPN3P20807 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.6□□□□□ -0.07
CAPN3P20807 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.6□□□□□ -0.07
CAPN3P20807 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.6□□□□□ -0.07
CAPN3P20807 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.6□□□□□ -0.07
CAPN3P20807 MIR4453-201ENST00000584019 89 ntBASIC14.6□□□□□ -0.07
CAPN3P20807 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.6□□□□□ -0.07
CAPN3P20807 MIR6080-201ENST00000617359 66 ntBASIC14.6□□□□□ -0.07
CAPN3P20807 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.6□□□□□ -0.07
CAPN3P20807 AL033527.5-202ENST00000641632 1098 ntBASIC14.6□□□□□ -0.07
CAPN3P20807 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CAPN3P20807 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CAPN3P20807 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CAPN3P20807 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
CAPN3P20807 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CAPN3P20807 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.6□□□□□ -0.07
CAPN3P20807 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.6□□□□□ -0.07
CAPN3P20807 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 AC007326.2-201ENST00000624224 7579 ntBASIC14.6□□□□□ -0.07
CAPN3P20807 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CAPN3P20807 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.6□□□□□ -0.07
CAPN3P20807 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
CAPN3P20807 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CAPN3P20807 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms