Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.08□□□□□ -0.16
UBL4AP11441 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 INTS4P2-202ENST00000614726 2019 ntBASIC14.08□□□□□ -0.16
UBL4AP11441 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UBL4AP11441 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.08□□□□□ -0.16
UBL4AP11441 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBL4AP11441 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.07□□□□□ -0.16
UBL4AP11441 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBL4AP11441 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
UBL4AP11441 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UBL4AP11441 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBL4AP11441 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.07□□□□□ -0.16
UBL4AP11441 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.07□□□□□ -0.16
UBL4AP11441 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.07□□□□□ -0.16
UBL4AP11441 AC002472.2-201ENST00000442739 958 ntBASIC14.07□□□□□ -0.16
UBL4AP11441 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.07□□□□□ -0.16
UBL4AP11441 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.07□□□□□ -0.16
UBL4AP11441 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 AC123567.1-201ENST00000548294 1261 ntBASIC14.07□□□□□ -0.16
UBL4AP11441 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.07□□□□□ -0.16
UBL4AP11441 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 MIR4745-201ENST00000577608 62 ntBASIC14.07□□□□□ -0.16
UBL4AP11441 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 RN7SL204P-201ENST00000582831 262 ntBASIC14.07□□□□□ -0.16
UBL4AP11441 BRI3BPP1-201ENST00000594224 787 ntBASIC14.07□□□□□ -0.16
UBL4AP11441 AL662799.1-202ENST00000614205 422 ntBASIC14.07□□□□□ -0.16
UBL4AP11441 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.07□□□□□ -0.16
UBL4AP11441 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
UBL4AP11441 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UBL4AP11441 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
UBL4AP11441 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
UBL4AP11441 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.07□□□□□ -0.16
UBL4AP11441 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBL4AP11441 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.07□□□□□ -0.16
UBL4AP11441 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
UBL4AP11441 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBL4AP11441 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UBL4AP11441 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 AC007326.2-201ENST00000624224 7579 ntBASIC14.06□□□□□ -0.16
UBL4AP11441 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
UBL4AP11441 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBL4AP11441 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.06□□□□□ -0.16
UBL4AP11441 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms