Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SMARCA5O60264 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.62■□□□□ 0.57
SMARCA5O60264 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.62■□□□□ 0.57
SMARCA5O60264 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.62■□□□□ 0.57
SMARCA5O60264 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.62■□□□□ 0.57
SMARCA5O60264 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SMARCA5O60264 SLC25A47P1-201ENST00000531577 414 ntBASIC18.62■□□□□ 0.57
SMARCA5O60264 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SMARCA5O60264 AL138709.1-201ENST00000614840 1693 ntBASIC18.62■□□□□ 0.57
SMARCA5O60264 MX1-218ENST00000619682 1980 ntTSL 5 BASIC18.62■□□□□ 0.57
SMARCA5O60264 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SMARCA5O60264 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMARCA5O60264 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCA5O60264 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCA5O60264 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.61■□□□□ 0.57
SMARCA5O60264 AC099063.4-201ENST00000641099 1602 ntBASIC18.61■□□□□ 0.57
SMARCA5O60264 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SMARCA5O60264 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SMARCA5O60264 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 TTTY23B-201ENST00000442790 549 ntBASIC18.61■□□□□ 0.57
SMARCA5O60264 AC007389.4-201ENST00000454674 793 ntBASIC18.61■□□□□ 0.57
SMARCA5O60264 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.61■□□□□ 0.57
SMARCA5O60264 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCA5O60264 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SMARCA5O60264 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.61■□□□□ 0.57
SMARCA5O60264 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCA5O60264 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMARCA5O60264 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.61■□□□□ 0.57
SMARCA5O60264 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCA5O60264 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SMARCA5O60264 AC018665.1-201ENST00000622927 1362 ntBASIC18.6■□□□□ 0.57
SMARCA5O60264 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SMARCA5O60264 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SMARCA5O60264 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SMARCA5O60264 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SMARCA5O60264 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SMARCA5O60264 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.6■□□□□ 0.57
SMARCA5O60264 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.6■□□□□ 0.57
SMARCA5O60264 AC011495.1-201ENST00000498085 584 ntBASIC18.6■□□□□ 0.57
SMARCA5O60264 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.6■□□□□ 0.57
SMARCA5O60264 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SMARCA5O60264 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SMARCA5O60264 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SMARCA5O60264 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCA5O60264 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.6■□□□□ 0.57
SMARCA5O60264 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.6■□□□□ 0.57
SMARCA5O60264 AC244669.2-201ENST00000612320 853 ntBASIC18.6■□□□□ 0.57
SMARCA5O60264 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SMARCA5O60264 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SMARCA5O60264 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SMARCA5O60264 AL009178.2-201ENST00000597278 2719 ntBASIC18.6■□□□□ 0.57
SMARCA5O60264 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 INE2-201ENST00000630399 1874 ntBASIC18.6■□□□□ 0.57
SMARCA5O60264 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.6■□□□□ 0.57
SMARCA5O60264 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.6■□□□□ 0.57
SMARCA5O60264 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SMARCA5O60264 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCA5O60264 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCA5O60264 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SMARCA5O60264 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms