Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LSM5Q9Y4Y9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM5Q9Y4Y9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LSM5Q9Y4Y9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM5Q9Y4Y9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 HLA-V-202ENST00000446817 847 ntBASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 DUX4L13-201ENST00000554103 1267 ntBASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 DUX4L15-201ENST00000611059 1267 ntBASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 DUX4L23-201ENST00000615195 1269 ntBASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 DUX4L24-201ENST00000617576 1269 ntBASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 DUX4L22-201ENST00000618238 1269 ntBASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 DUX4L20-201ENST00000619712 1269 ntBASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 DUX4L21-201ENST00000622058 1269 ntBASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 DUX4L10-201ENST00000622460 1267 ntBASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 DUX4L25-201ENST00000624915 1269 ntBASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM5Q9Y4Y9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
LSM5Q9Y4Y9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.83■□□□□ 0.61
LSM5Q9Y4Y9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM5Q9Y4Y9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM5Q9Y4Y9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM5Q9Y4Y9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.83■□□□□ 0.61
LSM5Q9Y4Y9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM5Q9Y4Y9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
LSM5Q9Y4Y9 C1orf229-201ENST00000623686 2258 ntBASIC18.83■□□□□ 0.61
LSM5Q9Y4Y9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LSM5Q9Y4Y9 AL162393.1-201ENST00000437852 946 ntBASIC18.83■□□□□ 0.6
LSM5Q9Y4Y9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM5Q9Y4Y9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.83■□□□□ 0.6
LSM5Q9Y4Y9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM5Q9Y4Y9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM5Q9Y4Y9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM5Q9Y4Y9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM5Q9Y4Y9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LSM5Q9Y4Y9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSM5Q9Y4Y9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.82■□□□□ 0.6
LSM5Q9Y4Y9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
LSM5Q9Y4Y9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM5Q9Y4Y9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM5Q9Y4Y9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM5Q9Y4Y9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms