Protein–RNA interactions for Protein: Q9Y287

ITM2B, Integral membrane protein 2B, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2BQ9Y287 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ITM2BQ9Y287 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ITM2BQ9Y287 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.15■■□□□ 1.3
ITM2BQ9Y287 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ITM2BQ9Y287 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
ITM2BQ9Y287 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ITM2BQ9Y287 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
ITM2BQ9Y287 AC020928.2-201ENST00000588717 2197 ntBASIC23.14■■□□□ 1.3
ITM2BQ9Y287 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.14■■□□□ 1.3
ITM2BQ9Y287 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ITM2BQ9Y287 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ITM2BQ9Y287 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.14■■□□□ 1.29
ITM2BQ9Y287 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.14■■□□□ 1.29
ITM2BQ9Y287 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.14■■□□□ 1.29
ITM2BQ9Y287 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ITM2BQ9Y287 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ITM2BQ9Y287 AC008406.3-201ENST00000620001 1374 ntBASIC23.14■■□□□ 1.29
ITM2BQ9Y287 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 AC004448.1-201ENST00000458332 883 ntBASIC23.13■■□□□ 1.29
ITM2BQ9Y287 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 HLA-L-211ENST00000482052 1765 ntBASIC23.13■■□□□ 1.29
ITM2BQ9Y287 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ITM2BQ9Y287 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ITM2BQ9Y287 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ITM2BQ9Y287 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ITM2BQ9Y287 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ITM2BQ9Y287 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.12■■□□□ 1.29
ITM2BQ9Y287 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
ITM2BQ9Y287 AC131281.2-201ENST00000520478 145 ntBASIC23.12■■□□□ 1.29
ITM2BQ9Y287 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.12■■□□□ 1.29
ITM2BQ9Y287 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.12■■□□□ 1.29
ITM2BQ9Y287 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 MIR3621-201ENST00000580529 85 ntBASIC23.11■■□□□ 1.29
ITM2BQ9Y287 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ITM2BQ9Y287 AC138932.3-201ENST00000567634 1902 ntBASIC23.1■■□□□ 1.29
ITM2BQ9Y287 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
ITM2BQ9Y287 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
ITM2BQ9Y287 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.1■■□□□ 1.29
ITM2BQ9Y287 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ITM2BQ9Y287 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
ITM2BQ9Y287 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.1■■□□□ 1.29
ITM2BQ9Y287 MIR6722-201ENST00000617286 78 ntBASIC23.1■■□□□ 1.29
ITM2BQ9Y287 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.1■■□□□ 1.29
ITM2BQ9Y287 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ITM2BQ9Y287 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ITM2BQ9Y287 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ITM2BQ9Y287 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ITM2BQ9Y287 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.09■■□□□ 1.29
ITM2BQ9Y287 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.09■■□□□ 1.29
ITM2BQ9Y287 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
ITM2BQ9Y287 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ITM2BQ9Y287 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ITM2BQ9Y287 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ITM2BQ9Y287 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.08■■□□□ 1.29
ITM2BQ9Y287 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.08■■□□□ 1.29
ITM2BQ9Y287 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.08■■□□□ 1.29
ITM2BQ9Y287 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
ITM2BQ9Y287 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ITM2BQ9Y287 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ITM2BQ9Y287 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.08■■□□□ 1.28
ITM2BQ9Y287 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.08■■□□□ 1.28
ITM2BQ9Y287 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ITM2BQ9Y287 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ITM2BQ9Y287 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ITM2BQ9Y287 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.07■■□□□ 1.28
ITM2BQ9Y287 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ITM2BQ9Y287 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ITM2BQ9Y287 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.07■■□□□ 1.28
ITM2BQ9Y287 AL356740.2-201ENST00000601559 647 ntBASIC23.07■■□□□ 1.28
ITM2BQ9Y287 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ITM2BQ9Y287 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
ITM2BQ9Y287 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ITM2BQ9Y287 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ITM2BQ9Y287 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.06■■□□□ 1.28
ITM2BQ9Y287 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.06■■□□□ 1.28
ITM2BQ9Y287 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.06■■□□□ 1.28
ITM2BQ9Y287 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.06■■□□□ 1.28
ITM2BQ9Y287 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
ITM2BQ9Y287 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ITM2BQ9Y287 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms