Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.6■■□□□ 1.53
CISHQ9NSE2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.6■■□□□ 1.53
CISHQ9NSE2 KRT125P-201ENST00000546827 989 ntBASIC24.6■■□□□ 1.53
CISHQ9NSE2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CISHQ9NSE2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CISHQ9NSE2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CISHQ9NSE2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CISHQ9NSE2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CISHQ9NSE2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CISHQ9NSE2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.59■■□□□ 1.53
CISHQ9NSE2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.59■■□□□ 1.53
CISHQ9NSE2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CISHQ9NSE2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CISHQ9NSE2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CISHQ9NSE2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CISHQ9NSE2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.58■■□□□ 1.53
CISHQ9NSE2 AC004448.1-201ENST00000458332 883 ntBASIC24.58■■□□□ 1.53
CISHQ9NSE2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
CISHQ9NSE2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CISHQ9NSE2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CISHQ9NSE2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.58■■□□□ 1.52
CISHQ9NSE2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CISHQ9NSE2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CISHQ9NSE2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CISHQ9NSE2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CISHQ9NSE2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.57■■□□□ 1.52
CISHQ9NSE2 MIR4787-201ENST00000607364 84 ntBASIC24.57■■□□□ 1.52
CISHQ9NSE2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CISHQ9NSE2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CISHQ9NSE2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CISHQ9NSE2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.56■■□□□ 1.52
CISHQ9NSE2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
CISHQ9NSE2 SNX5-217ENST00000606557 1087 ntBASIC24.56■■□□□ 1.52
CISHQ9NSE2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.56■■□□□ 1.52
CISHQ9NSE2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CISHQ9NSE2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CISHQ9NSE2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CISHQ9NSE2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CISHQ9NSE2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CISHQ9NSE2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.55■■□□□ 1.52
CISHQ9NSE2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CISHQ9NSE2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CISHQ9NSE2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.54■■□□□ 1.52
CISHQ9NSE2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CISHQ9NSE2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.54■■□□□ 1.52
CISHQ9NSE2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.54■■□□□ 1.52
CISHQ9NSE2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.54■■□□□ 1.52
CISHQ9NSE2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.54■■□□□ 1.52
CISHQ9NSE2 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.54■■□□□ 1.52
CISHQ9NSE2 AC092028.1-203ENST00000608262 953 ntBASIC24.54■■□□□ 1.52
CISHQ9NSE2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.54■■□□□ 1.52
CISHQ9NSE2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CISHQ9NSE2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CISHQ9NSE2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CISHQ9NSE2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
CISHQ9NSE2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CISHQ9NSE2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.53■■□□□ 1.52
CISHQ9NSE2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.53■■□□□ 1.52
CISHQ9NSE2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CISHQ9NSE2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CISHQ9NSE2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CISHQ9NSE2 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.52■■□□□ 1.52
CISHQ9NSE2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CISHQ9NSE2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CISHQ9NSE2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.52■■□□□ 1.52
CISHQ9NSE2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.52■■□□□ 1.52
CISHQ9NSE2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CISHQ9NSE2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CISHQ9NSE2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CISHQ9NSE2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CISHQ9NSE2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CISHQ9NSE2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CISHQ9NSE2 ABCB10P4-201ENST00000566803 2184 ntBASIC24.51■■□□□ 1.51
CISHQ9NSE2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CISHQ9NSE2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.51■■□□□ 1.51
CISHQ9NSE2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.5■■□□□ 1.51
CISHQ9NSE2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.5■■□□□ 1.51
CISHQ9NSE2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CISHQ9NSE2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CISHQ9NSE2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CISHQ9NSE2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.5■■□□□ 1.51
CISHQ9NSE2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.5■■□□□ 1.51
CISHQ9NSE2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CISHQ9NSE2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CISHQ9NSE2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CISHQ9NSE2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
CISHQ9NSE2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CISHQ9NSE2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CISHQ9NSE2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CISHQ9NSE2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.49■■□□□ 1.51
CISHQ9NSE2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CISHQ9NSE2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CISHQ9NSE2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CISHQ9NSE2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CISHQ9NSE2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CISHQ9NSE2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.48■■□□□ 1.51
CISHQ9NSE2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CISHQ9NSE2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CISHQ9NSE2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
CISHQ9NSE2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms