Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST4Q8NFU0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BEST4Q8NFU0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST4Q8NFU0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BEST4Q8NFU0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
BEST4Q8NFU0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.73■□□□□ 0.75
BEST4Q8NFU0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.73■□□□□ 0.75
BEST4Q8NFU0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST4Q8NFU0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.73■□□□□ 0.75
BEST4Q8NFU0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.73■□□□□ 0.75
BEST4Q8NFU0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST4Q8NFU0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST4Q8NFU0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BEST4Q8NFU0 C1orf229-201ENST00000623686 2258 ntBASIC19.72■□□□□ 0.75
BEST4Q8NFU0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST4Q8NFU0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.72■□□□□ 0.75
BEST4Q8NFU0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.72■□□□□ 0.75
BEST4Q8NFU0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BEST4Q8NFU0 CR559946.2-201ENST00000623684 991 ntBASIC19.72■□□□□ 0.75
BEST4Q8NFU0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BEST4Q8NFU0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.72■□□□□ 0.75
BEST4Q8NFU0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST4Q8NFU0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST4Q8NFU0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST4Q8NFU0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.7■□□□□ 0.74
BEST4Q8NFU0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
BEST4Q8NFU0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST4Q8NFU0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST4Q8NFU0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BEST4Q8NFU0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST4Q8NFU0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST4Q8NFU0 MIR3960-201ENST00000583311 91 ntBASIC19.68■□□□□ 0.74
BEST4Q8NFU0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.68■□□□□ 0.74
BEST4Q8NFU0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.68■□□□□ 0.74
BEST4Q8NFU0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.68■□□□□ 0.74
BEST4Q8NFU0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BEST4Q8NFU0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.68■□□□□ 0.74
BEST4Q8NFU0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BEST4Q8NFU0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 AC025884.2-201ENST00000553429 711 ntBASIC19.66■□□□□ 0.74
BEST4Q8NFU0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BEST4Q8NFU0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 LINC00526-201ENST00000581067 1875 ntBASIC19.65■□□□□ 0.74
BEST4Q8NFU0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms